G103427


Basic Information

Item Value
gene id G103427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 95068298 ~ 95070671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU115906
GTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATAACCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAATACTGTACCAATGGTATGAGGTATAGACTATAACCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAATACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTATGAGGTATAGACTATAACCAGGGAATACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTACag
>TU115907
GTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATAACCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAATACTGTACCAATGGTATGAGGTATTGATGTACAGACTATATCCAGGGAATACTCTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTATGAGGTATAGACTATATCCAGGGAACACTGTACCAATGGTACag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115906 False 482 lncRNA 0.41 2 95068298 95070671
TU115907 True 335 lncRNA 0.66 3 95068298 95070671

Neighbor

gene id symbol gene type direction distance location
LOC110533036 LOC106613909 coding downstream 646413 94380623 ~ 94421885 (-)
LOC110531886 LOC106577432 coding downstream 698271 94362379 ~ 94370027 (-)
LOC118966131 NA coding downstream 710456 94350278 ~ 94357842 (-)
LOC118966130 LOC106577431 coding downstream 726490 94323402 ~ 94341808 (-)
LOC110531895 LOC106613909 coding downstream 749924 94304371 ~ 94318374 (-)
LOC118966144 LOC106577436 coding upstream 564490 95635147 ~ 95672256 (-)
LOC110514271 rgs7 coding upstream 619044 95689394 ~ 95720002 (-)
G103412 NA non-coding downstream 28124 95037468 ~ 95040174 (-)
G103405 NA non-coding downstream 44233 95023057 ~ 95024065 (-)
G103396 NA non-coding downstream 57974 95009844 ~ 95010324 (-)
G103393 NA non-coding downstream 67783 94999682 ~ 95000515 (-)
G103384 NA non-coding downstream 100217 94967572 ~ 94968081 (-)
G103429 NA non-coding upstream 6136 95076807 ~ 95077227 (-)
G103431 NA non-coding upstream 14899 95085570 ~ 95086034 (-)
G103443 NA non-coding upstream 36338 95107009 ~ 95108760 (-)
G103448 NA non-coding upstream 52842 95123513 ~ 95123734 (-)
G103459 NA non-coding upstream 72548 95143219 ~ 95144019 (-)
G102887 NA other downstream 645211 94422808 ~ 94423087 (-)
G102679 NA other downstream 952610 94110119 ~ 94115688 (-)
G102641 LOC106593079 other downstream 1044995 94023009 ~ 94023303 (-)
LOC110513667 LOC106592544 other downstream 1467678 93182405 ~ 93710353 (-)
G103509 NA other upstream 178421 95249092 ~ 95327889 (-)
G103698 LOC106560310 other upstream 453721 95524392 ~ 95530959 (-)

Expression

G103427 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G103427 Expression in each Bioproject

Bar chart with 5 bars.
G103427 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 175.
End of interactive chart.

Co-expression Network