LOC118937315


Basic Information

Item Value
gene id LOC118937315
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 672497 ~ 676512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934866.1
ataaagaaaaaaatacaaaacatttttgtttgttttttaaaatcttaCATGACATTTACATATGAAAATGTACACAACATATTTAATAACTTACAAATGCTTCAATTGCATAAAAATATAATCTCTTTACGAAAggtttgaatatatatatatacatctacatTGGCTCTGAATTTGATTTTTATTAGGAGAACTTCTGCTTTATACAGTGAATTGCATTCTAAACTAGCTACTGATTTGTACAGTGAATTGCATTCTAAACTAGCTACTGATTTGTACAGTGAATTGCCATCTAAACTAGTTACCAATTTGTACACTGAATTGCATTCTAAACTTGTTTGAAGTCTTCGACTTTAAGACAAAAGTTTCAACATAgaccagatgttttttttttccatTGTTGTCAATAAGAAATGTGAGATTGTGATATGACATATTGATAAAACAAAAGACATTTGCCAAAGAGAATATGCCATCAAGTATCAAAACTGtataaatgtacaaaaaaaaacaacaacaacaacaacaaccaaatgTTAGTGCGATGACAAGATAAGAGACACATGGTAGAGGCAGCAGCGAGGCGATACTACGACGTGATCCTCTTTGGCAGACATGCACGAGTACGAGCTGCGTTCAGCACGTCTCTTCAACATGAGGAAGGCCGACAGAAAATACAGTACATCAACGTCCCAGTGTGGCACCCTatttccctacgtagtgcactacttctgaacaGGGCCCCACAGAGTTCTGggcaaaagtagggcactaaaatagggattagggtgccatttgggaaacattcTAAATCAACCCCCCTCCACACACTGGTGTGTTACTGATGAAATTATAATTCTGGTTTCTTTAACACTATGCCTATACAATACTTGACAAGGCACTGTCAGGATTTATTTAATGATTTTACAATGTTCCTTATTCCGGTAATGCACGAAACAGGCACGTAAAACGACGAGATATTGACGACAATGGCAACCGATTTCAAACGgctgcaaaatatatatatatacaggaatGTGAATGGAGGCCGATGATCCTAGACTcttaaagataaaaaaaaaagttgcaaTCTAGAATTAcagaagggttctttggctgtccccgtaggagaacccAGTGCAGAAGCCTTCTGggtaatttttttgggggggggtttcaTGTAGAAGAACAGCTGAAGAAGCCCTATGGAGCATTTTCATTCTAAGACTGTACTGTTACAGGAAAAACAAGCACCCATTTATTCCAGTCAACATCCATGGGACAGACACAGAGCAACATCTACAGTATGTGTAATAACTCTCTCAGACTCATTGGCTAGAGGATACACACCAATCTCaaacccctccccccctcctccaaaACAAAATAACTCAACTCAGAAAAAAGGAAATTCATGTTCTCTCCATCACACaaagaaaatactgtactttGATGATAACATTTCTCCTTAAATTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCCCAGTCAGGGTAAACACATAAGTCCTTCAGTTCTCAGTCAGGGTAAACACATAAGTCCTTCAGTTCTCAGTCAGGGTAAACACATAAGTCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATTATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATAAGTCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCTCAGTCAGGCTAAACACATGACACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCTCAGTCAGGGTAAACACATAAGTCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGATACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCTCAGTCAGGGTAAACACATGACACATCCTTCAGTTCTCAGTCAAGGTAGACACATGACACATCCAATCTTAAGTATCATTGGTGTTGAGAGTGCATCCAGTACATTGATATTATATACACTGACAGTATTCAAAGAGCGAGACAGCCTTTCtggtttccctgtctctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGtggtttccctgtctctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGtggtttccctgtctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGaggtttccctgtctctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGtggtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGtggtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGtggtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGttgtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGttgtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGaggtttccctgtctctctctctctgtctgacatcACACAGTGTGGGTAAAGAACGaggtttccctgtctctctctctcatcacacaGTGTGGGTAAAGAACGaggtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAACGaggtttccctgtctctctctctctctctgacatcacaCAGTGTGGGTAAAGAATGaggtttccctgtctctctctctctgtctgacatcACACAGTGTGGGTAAAGAACGAGACAGCAGATCACTTTGATCGACTCACGCTGAGAGGAACTTTTATGGATCAAATTAGATTCGCTTTAGCCAACATCCGCGGAGCTGATGTTCTGACGTGACGGAGGTGGAACTGCTTTGGAGCTGTCAGATCCACAAGCGGCTCCCGGCAGTACACCTTGTCATTGGCTGCACAGAGTCTTATTAAGAGAAATCCAAATCAGTCTTGTTTACAAGTTTGAACACTGACATGTGAGATATAATCTACACCTCGATAAAGGCTGATAGAAATCGTCATTATTTATTAGTTTTTGATGATTTTTTATAATTTTCAAAATAACCTAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106566263

GO:

id name namespace
GO:0044464 obsolete cell part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934866.1 True 3386 mRNA 0.41 2 672497 676512

Neighbor

gene id symbol gene type direction distance location
LOC118937314 NA coding downstream 164428 423319 ~ 508560 (-)
LOC118937313 NA coding downstream 189307 476561 ~ 484071 (-)
LOC110516483 LOC106573240 coding upstream 51142 727654 ~ 790871 (-)
eomesb eomesb coding upstream 129638 806150 ~ 813190 (-)
azi2 azi2 coding upstream 203306 879818 ~ 905418 (-)
LOC118937319 NA coding upstream 639152 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 750739 1427251 ~ 1457133 (-)
G104524 NA non-coding downstream 15424 656568 ~ 657073 (-)
G104523 NA non-coding downstream 16232 655771 ~ 656265 (-)
G104498 NA non-coding downstream 53443 618307 ~ 619054 (-)
G104490 NA non-coding downstream 64743 606170 ~ 607754 (-)
G104487 NA non-coding downstream 71829 599022 ~ 600668 (-)
G104535 NA non-coding upstream 3961 680473 ~ 680698 (-)
G104539 NA non-coding upstream 8414 684926 ~ 685203 (-)
G104557 NA non-coding upstream 31647 708159 ~ 715057 (-)
G104560 NA non-coding upstream 38755 715267 ~ 715779 (-)
G104564 NA non-coding upstream 40161 716673 ~ 717468 (-)
G105220 NA other upstream 657474 1333986 ~ 1342335 (-)
G105285 NA other upstream 864218 1540730 ~ 1541706 (-)
LOC110515405 LOC106590999 other upstream 917269 1573402 ~ 1683489 (-)
G105340 NA other upstream 964755 1641267 ~ 1641732 (-)
G105427 NA other upstream 1236080 1912592 ~ 1917188 (-)

Expression


Co-expression Network