LOC118937319


Basic Information

Item Value
gene id LOC118937319
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1314565 ~ 1316245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034579.1
ggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggagGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGgTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGG
>XR_005034578.1
ggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGgTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGG
>TU118539
TcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGATAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTcctcacagagacatggaggTAAATGGAGGTAAATTAAACACTCCTcacagagacatggacagatgtGGAAGTGAATAAAACAATGGAGGTGAAGAATGTCCTTCCCTGTCATGTTTCCTCCCAGAAACCAAAACATCCTGTTTGAGCCTCAAAATATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034579.1 False 299 mRNA 0.41 3 1315664 1316080
XR_005034578.1 False 264 mRNA 0.41 3 1315664 1316245
TU118539 True 435 lncRNA 0.44 2 1314565 1315809

Neighbor

gene id symbol gene type direction distance location
azi2 azi2 coding downstream 410246 879818 ~ 905418 (-)
eomesb eomesb coding downstream 502474 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 524793 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 639152 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 807595 423319 ~ 508560 (-)
LOC110515934 gadl1 coding upstream 111006 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 257157 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 386706 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 393271 1709516 ~ 1732333 (-)
nrsn1 nrsn1 coding upstream 604765 1921010 ~ 1925939 (-)
G105200 NA non-coding downstream 10921 1304512 ~ 1304743 (-)
G105197 NA non-coding downstream 17018 1298370 ~ 1298646 (-)
G104898 NA non-coding downstream 37498 1277656 ~ 1278166 (-)
G104892 NA non-coding downstream 50235 1264427 ~ 1265429 (-)
G104890 NA non-coding downstream 57590 1257807 ~ 1258074 (-)
G105230 NA non-coding upstream 47508 1363753 ~ 1376441 (-)
G105231 NA non-coding upstream 53716 1369961 ~ 1371674 (-)
G105205 NA non-coding upstream 60838 1377083 ~ 1390929 (-)
G105244 NA non-coding upstream 82228 1398473 ~ 1402640 (-)
G105257 NA non-coding upstream 119945 1436190 ~ 1438620 (-)
G105220 NA other upstream 17741 1333986 ~ 1342335 (-)
G105285 NA other upstream 224485 1540730 ~ 1541706 (-)
G105340 NA other upstream 325022 1641267 ~ 1641732 (-)
G105427 NA other upstream 596347 1912592 ~ 1917188 (-)

Expression


Co-expression Network