LOC118944030


Basic Information

Item Value
gene id LOC118944030
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2418186 ~ 2420621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961507.1
ATGAAAAGGACAAATACCAAACTAAAGACTCCAAAACAAAGGAAAGGCCTCAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCATCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTAAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACACAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTAAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCATTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTAAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTTCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTAAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCAATGAACAAACACAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTAAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAGTCCACTAAACAAACCCAGCAGCCCAACAAGTCCACTGAACAAACCCAGCAGCCCAACAAGTCCACTAAACAAACCCAGCAGTCCAACAAGTCCACTGAACAAACCCAGCAGTCCAACAAAAGGAATAACAACTTCTTAGATATTCAATGA

Function

NR:

description
mucin-17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961507.1 True 1314 mRNA 0.49 2 2418186 2420621

Neighbor

gene id symbol gene type direction distance location
LOC118944029 NA coding upstream 240190 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 297731 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 516738 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 564616 1816808 ~ 1853570 (+)
LOC110514512 LOC105016610 coding upstream 623248 1745298 ~ 1794938 (+)
LOC118937340 NA coding downstream 557615 2978236 ~ 2978524 (+)
LOC118937337 NA coding downstream 558165 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 986566 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1630162 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1645371 4065992 ~ 4085680 (+)
G105853 NA non-coding upstream 7733 2409517 ~ 2410453 (+)
G105847 NA non-coding upstream 22498 2393482 ~ 2395688 (+)
G105839 NA non-coding upstream 32816 2384991 ~ 2385370 (+)
G105837 NA non-coding upstream 36139 2381345 ~ 2382047 (+)
G105824 NA non-coding upstream 52679 2364793 ~ 2365507 (+)
G105871 NA non-coding downstream 25471 2446092 ~ 2446640 (+)
G105878 NA non-coding downstream 32539 2453160 ~ 2453377 (+)
G105880 NA non-coding downstream 35141 2455762 ~ 2456194 (+)
G105882 NA non-coding downstream 37981 2458602 ~ 2458918 (+)
G105883 NA non-coding downstream 38441 2459062 ~ 2459327 (+)
G105042 NA other upstream 707629 1708969 ~ 1710557 (+)
G105036 NA other upstream 717755 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1065323 1309202 ~ 1390936 (+)
G104761 NA other upstream 1264437 1153061 ~ 1153749 (+)
cmc1 cc068 other upstream 1545671 860459 ~ 872515 (+)
G106019 NA other downstream 100095 2520716 ~ 2527972 (+)
G106122 NA other downstream 297340 2717961 ~ 2718525 (+)
G106240 NA other downstream 554202 2974823 ~ 3039475 (+)
G106253 cdkal other downstream 786176 3006312 ~ 3391033 (+)

Expression


Co-expression Network