Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110514306 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 2518187 ~ 2519022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036961522.1 | True | 836 | mRNA | 0.46 | 1 | 2518187 | 2519022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512766 | LOC106593784 | coding | downstream | 1768 | 2513710 ~ 2516419 (-) |
| sox4b | sox4 | coding | downstream | 68426 | 2446374 ~ 2449761 (-) |
| LOC118937335 | NA | coding | downstream | 77885 | 2273420 ~ 2440302 (-) |
| LOC118937333 | NA | coding | downstream | 214306 | 2302636 ~ 2303881 (-) |
| nrsn1 | nrsn1 | coding | downstream | 592248 | 1921010 ~ 1925939 (-) |
| LOC110511524 | NA | coding | upstream | 14780 | 2533802 ~ 2536162 (-) |
| cdkal1 | cdkal | coding | upstream | 125868 | 2644890 ~ 3391012 (-) |
| LOC118937342 | e2f3 | coding | upstream | 873624 | 3392063 ~ 3405112 (-) |
| LOC118944031 | NA | coding | upstream | 922064 | 3441086 ~ 3443541 (-) |
| LOC110514058 | LOC105007466 | coding | upstream | 928135 | 3447157 ~ 3520769 (-) |
| G106005 | NA | non-coding | downstream | 32565 | 2485198 ~ 2485622 (-) |
| G106000 | NA | non-coding | downstream | 35709 | 2482269 ~ 2482478 (-) |
| G105997 | NA | non-coding | downstream | 37637 | 2479196 ~ 2480550 (-) |
| G105996 | NA | non-coding | downstream | 40637 | 2475370 ~ 2477550 (-) |
| G105995 | NA | non-coding | downstream | 43161 | 2474692 ~ 2475026 (-) |
| G106043 | NA | non-coding | upstream | 33838 | 2552860 ~ 2553853 (-) |
| G106044 | NA | non-coding | upstream | 34975 | 2553997 ~ 2554368 (-) |
| G106047 | NA | non-coding | upstream | 36484 | 2555506 ~ 2555721 (-) |
| G106048 | NA | non-coding | upstream | 37922 | 2556944 ~ 2557296 (-) |
| G106052 | NA | non-coding | upstream | 44716 | 2563738 ~ 2563959 (-) |
| G106003 | NA | other | downstream | 33064 | 2483860 ~ 2485123 (-) |
| G106001 | NA | other | downstream | 34831 | 2482941 ~ 2483356 (-) |
| G105938 | NA | other | downstream | 154656 | 2362999 ~ 2363531 (-) |
| G105636 | NA | other | downstream | 397686 | 2118079 ~ 2120501 (-) |
| G105492 | NA | other | downstream | 556600 | 1958484 ~ 1961587 (-) |
| LOC110506994 | carmil1 | other | upstream | 1233539 | 3705036 ~ 3924570 (-) |
| G107456 | NA | other | upstream | 1472304 | 3991326 ~ 3992847 (-) |
| G107574 | NA | other | upstream | 1776403 | 4295425 ~ 4296815 (-) |
| G107576 | NA | other | upstream | 1778423 | 4297445 ~ 4302456 (-) |
| G107755 | NA | other | upstream | 1856900 | 4375922 ~ 4376423 (-) |
