LOC110511524


Basic Information

Item Value
gene id LOC110511524
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2533802 ~ 2536162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961533.1
aattgtgaaaaagtgagtttaaatgtatttggctaaaatgTACGTATACTTAcgactttaactgtatatgttttttttttgtgcttGGGAAGGGGTTGTCTTTTTCAACAAGTTGCTGAAATGGCTGGCCAGTTTCCAGGAGAAGCAGGAGGCCTTGGACAATGTGCACCTCCTCATTGGTCATGGGGAAAACAACATGGATGCTGCCCTCCAGGCCCTCTCTCAGGGCATAGAAACATACCAGATTCAACCCGGTTGCCTGGAGTGTTTCTTCAATGATGGCGAGGCTCCTGATCCCGGCCTTCTCCCAAACCATCTGAGTGTCCTTCCAGACTGGACTCTGCTGCCGTTGACGAACGGGACACTTCCCCCCTACATGATATACATTCTGCAGCGGAGGCCAGTGATACAGGGTATCCAAGTGGAAGATCACAGCTTACCCAGTGGGAACAACACCTCTCGGCCCATACGGCAGGTATTCTACGGGCTGCTGCTGGGTGAAGGGAGGGAAGTGGAGGAGTATGACAGGGAAGAAACAAACCTGACCAGCAGCAAGGTTAATGCCATCCTGCCCAGTGCTGCACAACAGCTGCAGCTGGACACACTGGATCAGACTCCATATTTTGAGCGGCGTGAGGTATTTTTGGAGACCCTTGGTGTGTCCCAGTCCACTTTGAATGGTCTCCCACTTCACCTGGGACTTCCTGTGGCTGTTACCTACTACTGGCTGAGGCACGCCCATCCCCGACCAGACCTTCCTCTCCTGCAGGCCCTGCTACTAGGACTGGTGTATGGAGAGCTCTGCAGACAGAGGAAGAGCCAGAGAGGTATGGACCAGAGCAtgaatgaaaacacacacacagccacacacaactTGGAATTTATAAATAAAGTGCGGTTTATAGAGGAGGAACCAGTgttggagaggatgagagggctGATTCAGAGACGTGCTATGAGTCCAGACCTGGGTGTGGTCCACGCCTATAGCCAATGGAAGCGCTGCATGAGGGATTGCCTTGACCTGAACCAACTGCTGTGCTTCCCTCTACCTGAGCCTCAGTGTGCCTGGCTGTACAAGGGCACTCTGGTGCACCAGCTTGTGGGCCAACTGAGACGGGGGGTGACCCCGGATTCTCTCCTGATGGAAGACCCTTCATCTGGGCAGCTGTACAAAGCCATGCTGGACGCCATGCGTCCATACTCAACTTCCAGGAAGCTGAGACCACTGGACAACCTGACGGCCCCTCTGCAGATTCTGTCGCTGGAGGATGAAGaatttgatgatgatgatgatgatgatggagtaGGCTGTACTGAAGTCCCAATGTCCCGTCACAAGAGGAAGGAAAGATTCAATAAAGCTCTGTTGAGTTATAGATATAGGGACCACTAAATAGGGACCACCTGTTGAGTTATATACTGTTTTCTGTGACATTAAAGTGACAGAGTGCATAGGTAGGAAGGCCCCATTTGCATACACTCATACTCATGAAGCGCTTCCCCTTTCACTTACACATGGAGCACAGAGAACATTGATAAGAGATTTGACATTGATtaaaagaaaataagaaaaatgagagtaaattattatttttttattgtgactgAGGTTTATTGAAGTGAAAATTCAAGGTTAAATATGTTAAATGTTAAAGGTTGAAAACATTGTGAAATAAACATTGTGAAATAAACATTGTGAAATAAACATTGTGAAATAAACATTGTGAAATATTAAAGGGGAGTTAAAGTAGTGCAGTAAAATGTTAGAATGTTATATTGTTGTTTGCTGTAAGGTGTGATGcatattgactatgtttgttagAGGAGGAGGTTGATAATCTAATGGAGTTGGAACGTTTAAAATGTTGGATGTTTAGAAGGTAATGGGAGAAATATATTAGGTTGGATTAGGATTAGAATTGAATGGAATAAGAAAATGTATGTTTGA

Function

NR:

description
protein asteroid homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961533.1 True 1951 mRNA 0.46 4 2533802 2536162

Neighbor

gene id symbol gene type direction distance location
LOC110514306 NA coding downstream 14780 2518187 ~ 2519022 (-)
LOC110512766 LOC106593784 coding downstream 17383 2513710 ~ 2516419 (-)
sox4b sox4 coding downstream 84041 2446374 ~ 2449761 (-)
LOC118937335 NA coding downstream 93500 2273420 ~ 2440302 (-)
LOC118937333 NA coding downstream 229921 2302636 ~ 2303881 (-)
cdkal1 cdkal coding upstream 108728 2644890 ~ 3391012 (-)
LOC118937342 e2f3 coding upstream 856484 3392063 ~ 3405112 (-)
LOC118944031 NA coding upstream 904924 3441086 ~ 3443541 (-)
LOC110514058 LOC105007466 coding upstream 910995 3447157 ~ 3520769 (-)
LOC110512975 LOC105909030 coding upstream 991208 3527370 ~ 3663403 (-)
G106005 NA non-coding downstream 48180 2485198 ~ 2485622 (-)
G106000 NA non-coding downstream 51324 2482269 ~ 2482478 (-)
G105997 NA non-coding downstream 53252 2479196 ~ 2480550 (-)
G105996 NA non-coding downstream 56252 2475370 ~ 2477550 (-)
G105995 NA non-coding downstream 58776 2474692 ~ 2475026 (-)
G106043 NA non-coding upstream 16698 2552860 ~ 2553853 (-)
G106044 NA non-coding upstream 17835 2553997 ~ 2554368 (-)
G106047 NA non-coding upstream 19344 2555506 ~ 2555721 (-)
G106048 NA non-coding upstream 20782 2556944 ~ 2557296 (-)
G106052 NA non-coding upstream 27576 2563738 ~ 2563959 (-)
G106003 NA other downstream 48679 2483860 ~ 2485123 (-)
G106001 NA other downstream 50446 2482941 ~ 2483356 (-)
G105938 NA other downstream 170271 2362999 ~ 2363531 (-)
G105636 NA other downstream 413301 2118079 ~ 2120501 (-)
G105492 NA other downstream 572215 1958484 ~ 1961587 (-)
LOC110506994 carmil1 other upstream 1216399 3705036 ~ 3924570 (-)
G107456 NA other upstream 1455164 3991326 ~ 3992847 (-)
G107574 NA other upstream 1759263 4295425 ~ 4296815 (-)
G107576 NA other upstream 1761283 4297445 ~ 4302456 (-)
G107755 NA other upstream 1839760 4375922 ~ 4376423 (-)

Expression


Co-expression Network