LOC118937340


Basic Information

Item Value
gene id LOC118937340
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 2978236 ~ 2978524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034608.1
GTTCTGATCTCTATAGCCTCTATaggtcctgttctgatctctataggtcctgttctgatctctatagCCTCTATaggtcctgttctgatctctatagcctctataggtcctgttctgatctctatagCCTCTATaggtcctgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034608.1 True 145 mRNA 0.43 3 2978236 2978524

Neighbor

gene id symbol gene type direction distance location
LOC118944030 NA coding upstream 557615 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 800240 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 857781 2116553 ~ 2120455 (+)
LOC110511503 LOC106605726 coding upstream 1076788 1865365 ~ 1901456 (+)
slc6a3 slc6a3 coding upstream 1124666 1816808 ~ 1853570 (+)
LOC118937337 NA coding downstream 262 2978786 ~ 2980193 (+)
mboat1 LOC106573215 coding downstream 428663 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 1072259 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 1087468 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1134598 4113122 ~ 4119742 (+)
G106238 NA non-coding upstream 6657 2970334 ~ 2971579 (+)
G106229 NA non-coding upstream 28532 2947549 ~ 2949704 (+)
G106224 NA non-coding upstream 36683 2941146 ~ 2941553 (+)
G106194 NA non-coding upstream 105318 2872322 ~ 2872918 (+)
G106170 NA non-coding upstream 165647 2811831 ~ 2812589 (+)
G106243 NA non-coding downstream 872 2979396 ~ 2980334 (+)
G106247 NA non-coding downstream 9623 2988147 ~ 2989181 (+)
G106252 NA non-coding downstream 26540 3005064 ~ 3005325 (+)
G106253 cdkal non-coding downstream 27788 3006312 ~ 3391033 (+)
G106260 NA non-coding downstream 46609 3025133 ~ 3025905 (+)
G106122 NA other upstream 259711 2717961 ~ 2718525 (+)
G106019 NA other upstream 450264 2520716 ~ 2527972 (+)
G105042 NA other upstream 1267679 1708969 ~ 1710557 (+)
G105036 NA other upstream 1277805 1699073 ~ 1700431 (+)
tgfbr2b LOC106606173 other upstream 1625373 1309202 ~ 1390936 (+)
G106575 NA other downstream 660910 3639434 ~ 3800352 (+)
G106595 NA other downstream 697741 3676265 ~ 3677850 (+)
G106775 NA other downstream 1048551 4027075 ~ 4027594 (+)

Expression


Co-expression Network