LOC118944031



Basic Information


Item Value
gene id LOC118944031
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3441086 ~ 3443541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036961539.1
ATGTTCCCCGTGTGTATGACTTgtGACACAGCCAAGACTCAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCAGGACTCAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCAGGACTCAGCCAGGACACAGCCAGGACACAGCCAGGACAGCCAAGACTCAGCCAGGACTCAGCCAGGACTCAGCCAGGACACAGCCAGGATACAGCCAGGACACAGCAAGGACACAGCCAAGACTCAGCCAGGACACAGCCAGGACTCAGCCAAGACTCAGCCAGGACACAGCCAGGACACAGCCAAGACTCAGCCAGGACTCAGCCAGGACTCAGCCAGAACTCAGCCAGGACTCAGCCAAGACTCAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCGGGACTCAGCCAGGACTCAGCCAAGACTCAGCCAGGACACAGCCAGGACACAGCCAGGAGAGCCAAGACTCAGCCAGGACTCAGCCAGGACACAGCCAGGATACAGCCAGGACACAGCCAAGACTCAGCCAGGACTCAGCCAGGACTCAGCCAGGACTCAGCCAGGACTCAGCCAAGACTCAGCCAGGACACAGCCGAGACTCAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCGGGACACAGCCAGGACACAGCCAAGACTCAGCCAGGACACAGCCAGGATACAGCCAGGACACAGCCAGGACACAGCCAGGACTCAGCCAGGACACAGCCAAGACTCAGCCAAGACTCAGGAGAAGTAA

Function


NR:

description
zinc finger E-box-binding homeobox 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036961539.1 True 795 mRNA 0.60 2 3441086 3443541

Neighbor


gene id symbol gene type direction distance location
LOC118937342 e2f3 coding downstream 35974 3392063 ~ 3405112 (-)
cdkal1 cdkal coding downstream 50074 2644890 ~ 3391012 (-)
LOC110511524 NA coding downstream 904924 2533802 ~ 2536162 (-)
LOC110514306 NA coding downstream 922064 2518187 ~ 2519022 (-)
LOC110512766 LOC106593784 coding downstream 924667 2513710 ~ 2516419 (-)
LOC110514058 LOC105007466 coding upstream 3616 3447157 ~ 3520769 (-)
LOC110512975 LOC105909030 coding upstream 83829 3527370 ~ 3663403 (-)
LOC118937345 NA coding upstream 171542 3615083 ~ 3619295 (-)
LOC118937344 NA coding upstream 192105 3635646 ~ 3637696 (-)
LOC118937343 NA coding upstream 197753 3641294 ~ 3643287 (-)
G107270 NA non-coding downstream 7965 3431926 ~ 3433121 (-)
G107219 NA non-coding downstream 15108 3367145 ~ 3425978 (-)
G107261 NA non-coding downstream 25606 3414342 ~ 3415480 (-)
G107232 NA non-coding downstream 75622 3363896 ~ 3365464 (-)
G107282 NA non-coding upstream 11882 3455423 ~ 3456292 (-)
G107303 NA non-coding upstream 61440 3504981 ~ 3506013 (-)
G107306 NA non-coding upstream 69972 3513513 ~ 3513988 (-)
G107254 NA non-coding upstream 81073 3524614 ~ 3526803 (-)
G107315 NA non-coding upstream 122731 3566272 ~ 3566645 (-)
G106003 NA other downstream 955963 2483860 ~ 2485123 (-)
G106001 NA other downstream 957730 2482941 ~ 2483356 (-)
G105938 NA other downstream 1077555 2362999 ~ 2363531 (-)
G105636 NA other downstream 1320585 2118079 ~ 2120501 (-)
G105492 NA other downstream 1479499 1958484 ~ 1961587 (-)
LOC110506994 carmil1 other upstream 309020 3705036 ~ 3924570 (-)
G107456 NA other upstream 547785 3991326 ~ 3992847 (-)
G107574 NA other upstream 851884 4295425 ~ 4296815 (-)
G107576 NA other upstream 853904 4297445 ~ 4302456 (-)
G107755 NA other upstream 932381 4375922 ~ 4376423 (-)

Expression



Co-expression Network