LOC110514058 (LOC105007466)


Basic Information

Item Value
gene id LOC110514058
gene name LOC105007466
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3447157 ~ 3520769 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935266.1
TATGCTCAAATGTCCTGTGCAGACGTCCTTAGGATGTCTATTGATACCTGCCGCAAATAGGCCTACAGTAGGCTATTGGTCTAGTGGTACCTTCGCACTCACTGTATGAGCTATACAAAAACGTAAGGCAGATGCCGTCATAGCTACGTATAGTCAAGCTATTCCATTGGAAAATATTTTTAGCCTCGAGAGAAGGGCGCACATCACGGGGAAGAGAAGCAGCCCATCCGACCGCAGACGGGGAAGAAGCCTAGGCGATGTTGTGGCTTTGAAGATGAGGAGGAATGTTTCCTTTTTGACTCGCCGATCTTGCCACGAATGTGTTTTGTTGGCGAATTGTTTTCATGATCTATGAAATTGTGATCGAAGGACTTATGGTTCGGTGCTGCGTTTTACACCCGAAAGAGATCTGATTTTTTGACAGGACAGAGCATCCGCTGATCGAGAGGTTGTCGACGCCTCCACTTCCCTTTTGTCTCCACCATGCTGCCCAGTTTGCAGAGAGTCCTGCGGCCCGCCCTCATTCTGAGGTCGGGGAACATGTTGGGAAGAGTCCACGGGTCAAACCTAGCTCCGCTACGCCAGCCTGTACCGATGCTACCCAGCCAGCAGAGCTGCGACTTGGGCACACACCCTCACAAGGACCCGATGGAGCCCTTGAACTCGCCTCAAGGAGCCAAGGATTTTATTTATAGTCTTCACCCCACCGAACGCACAACCATGCTCAGAGAACTGCACCGGTTTGAGTCGATAGCAATAGCTCAAGGGGAAATGGTCATCGCCCCTCCCACATCGGCTCAGCTGAGATAcgTTCTTCTACACAACGCCATTCCGTTTGTAGGATTTGGTTTCCTGGACAATGCCATCATGATTGTAGCTGGCACGCAGATTGAGTTGTCCATAGGTGTGATCCTTGGGATTTCAACCATGGCAGctgCTGCCCTGGGGAACCTTGTGTCGGACCTGGCTGGACTCGGCCTTGCAGGTTACGTGGAAGCCCTGGCCTGTCGTTGTGGGTTGGTGGGCCCTGATCTGAACCCCAAACAGGCTGACATGTGGCAGACCAGGGTTAGCACCCACAGTGGTAAAGCCATCGGCGTTGCCATCGGCTGCATCTTAGGGATGTTCCCGCTCCTCTTCTTCAAAGATGAGACGAAGAAGAAAGCAGCGGAGAGGGAGGGTAAAGATGGATCACTAACCTCCATCTCCACTGGCAGCAGCAGCAGTTGAGGCAACTTGACAGAAAGACTCACCTTctcgggaagagagagagcgagagagagagaacttatCGTTGGACTACCTGCTACTTCACAACCTAACTACTGCGTAATGAATAACCTCAATCAAGCGTGACTACGGATGTCAATTGTTGATGTCAACGTCTTAAATAGTTCCTACTGCAACGTTCAAAAAGCAGTATGAAGAAAAACAACAACGATGATATAAATACAAGTGGACCACTTCTTCCAA

Function

NR:

description
transmembrane protein 65-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935266.1 True 1473 mRNA 0.50 8 3447157 3520769

Neighbor

gene id symbol gene type direction distance location
LOC118944031 NA coding downstream 3616 3441086 ~ 3443541 (-)
LOC118937342 e2f3 coding downstream 42045 3392063 ~ 3405112 (-)
cdkal1 cdkal coding downstream 56145 2644890 ~ 3391012 (-)
LOC110511524 NA coding downstream 910995 2533802 ~ 2536162 (-)
LOC110514306 NA coding downstream 928135 2518187 ~ 2519022 (-)
LOC110512975 LOC105909030 coding upstream 6601 3527370 ~ 3663403 (-)
LOC118937345 NA coding upstream 94314 3615083 ~ 3619295 (-)
LOC118937344 NA coding upstream 114877 3635646 ~ 3637696 (-)
LOC118937343 NA coding upstream 120525 3641294 ~ 3643287 (-)
LOC110505062 LOC106572986 coding upstream 155496 3676265 ~ 3701014 (-)
G107270 NA non-coding downstream 14036 3431926 ~ 3433121 (-)
G107219 NA non-coding downstream 21179 3367145 ~ 3425978 (-)
G107261 NA non-coding downstream 31677 3414342 ~ 3415480 (-)
G107232 NA non-coding downstream 81693 3363896 ~ 3365464 (-)
G107254 NA non-coding upstream 3845 3524614 ~ 3526803 (-)
G107315 NA non-coding upstream 45503 3566272 ~ 3566645 (-)
G107316 NA non-coding upstream 48700 3569469 ~ 3572630 (-)
G107323 NA non-coding upstream 71218 3591987 ~ 3593189 (-)
G106003 NA other downstream 962034 2483860 ~ 2485123 (-)
G106001 NA other downstream 963801 2482941 ~ 2483356 (-)
G105938 NA other downstream 1083626 2362999 ~ 2363531 (-)
G105636 NA other downstream 1326656 2118079 ~ 2120501 (-)
G105492 NA other downstream 1485570 1958484 ~ 1961587 (-)
LOC110506994 carmil1 other upstream 231792 3705036 ~ 3924570 (-)
G107456 NA other upstream 470557 3991326 ~ 3992847 (-)
G107574 NA other upstream 774656 4295425 ~ 4296815 (-)
G107576 NA other upstream 776676 4297445 ~ 4302456 (-)
G107755 NA other upstream 855153 4375922 ~ 4376423 (-)

Expression


Co-expression Network