mal2 (mal2)


Basic Information

Item Value
gene id mal2
gene name mal2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4065992 ~ 4085680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036935438.1
TAGATAAGTGACAGGACTCTTGCTCTATTAAATTCAGAGGCTTGCAGGTGTAGGCTATGGCCacgccccaaatggcacctttaaacgtagtgcactatgtagggcgtGAGGTGCTATTTGGTGACGTTTCTCTGTGGGTCATGGTTATTGAGTAAACAACTTAAGTTGTGCAATTATTGACCTAAACCGTGAAGCTGTTTCAGCTTGCAGATAAATCACAGCTCTGCTTTCCGTTTCTCAGACTCCTCTCACCTTGGAATTTTCTCCCCCTGCAGGTAGACTAATATTGACTTTAGAGTGGCCTATCAACATCTGTGGAAGTTAATCGGCATCACTGCATCCAGTCTGCCTGTTTGTATCGTATTTTGTTCTCGAAAAAGATTCTATAGTAGAGCCAATCTTTCATTTTCTCAGGCACGTTCAATTCGTAGCAGATTCATCTTTAGCGAGTCGCGACGGAGAGATCGGGGTGAGAGGTATTGCGGTAACTGCGACTGCCTCCACTCTGCGGGCGAGTAGAGGTGGATAAAGTGAAAGGAGGAGCCGTGCACCTGTTAGACCAGTTAGGGACACATGACTGCAGAAGAATTTGCCTGAGTTGGTGTCCTTTGTCGAGATACAAGACGGGAAGGATGTCGGAGCCAGCGACGAATCCTGCGGTGACAGCATTCCCAGCGCCGACGATATCTTTGCCATTGGGACTACAAATATTGAGGACGTACTCCGGTGCTCTGATCTGCTTGGAAATTATATTTGGAGGGCTAGTATGGATCCTGGTGGCCTCCTCCAACGTGCCCGTGCCCCTGCTACAGGGCTGGGTGATGTTTGTCTCTGTCAGCACGTTCTTCTGTTCCAGCGtgtacctcctcctcttcctcctgggaTTGGCTGACAGGATCAACACCGACTGGAACCTGATGGATGTGCTGTACCACTTCACAGCACTGCTGTTCTACTTCAGTGCCTTGGTGCTGGAGGCTGCTGTTACGGCTGCCAGAGGGGTCATCAGGAGTACCAACAGCTCCATACCAGGATGTGTAATGGCCCCTAGTGGAAATATACTCACCTTCCTGGACAACAGACAATACAGTATTAACGTGGCAGCTACGATATTTGCCTTCGTGGTGACACTCTGCTACGCCTGCAGCATGTTCATGGGCTTCAGGAGGTGGCAGATGTGACACGGAAGAAAGAAAACGCACCATTTACGTTTTTACAGTTCAAACTCCTACCGTGCCGTCAAGACATTGTCACGTTGTCTGTTTATTACATGTGtataacattattatttttttaaagagaaCGAATGTATCGTGATATTTGCATCAAGTTTATATTTGTTGCAATGAGATCAAGACAGAACACTTTGTTGTATCTGTCATGTAATAACAGCACACCAGGCGTTATGGCGAAGCTACCAGATGTTGTAGTTCACATGTTAGTGCTTGGTTTCTGAGGCCCGACATGTTTAGTTGTGTGATCAATAGTGTAGATTTTATTTATTAGTATTTGATTCCCTGTAAATTGAATTAAACTCTGGATCAGAAGAGACCTATAACTGATTAAATAACAATAATGTTAGTTATATTTTCCCCTTGTAGAATGTCTAACTTTTTTAGAGCAACATGGAAAACTATGTGAAACATACCACATAGGACAATTATCATCATAATCACTTAATGACATTGTGTGAATATCTACTGGAATATATTGAGTATATTCTGTGATTTCTGAAATgcatttttacaaataaataactTTTCTTATCTTGTCGA

Function

symbol description
mal2 Predicted to be a structural constituent of myelin sheath. Predicted to be involved in myelination. Predicted to act upstream of or within transcytosis. Predicted to be located in membrane raft. Predicted to be integral component of membrane. Orthologous to human MAL2 (mal, T cell differentiation protein 2).

NR:

description
protein MAL2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036935438.1 True 1775 mRNA 0.44 4 4065992 4085680

Neighbor

gene id symbol gene type direction distance location
colec10 LOC106591867 coding upstream 385 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 643893 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1085799 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 1087468 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1645371 2418186 ~ 2420621 (+)
LOC110507036 LOC106594376 coding downstream 27442 4113122 ~ 4119742 (+)
deptor deptor coding downstream 151200 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 242303 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 517278 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 548823 4634503 ~ 4636138 (+)
G106793 NA non-coding upstream 11340 4054266 ~ 4054652 (+)
G106790 NA non-coding upstream 18368 4046707 ~ 4047624 (+)
G106773 NA non-coding upstream 40140 4025592 ~ 4025852 (+)
G106764 NA non-coding upstream 53453 4012139 ~ 4012539 (+)
G106761 NA non-coding upstream 57569 4007937 ~ 4008423 (+)
G106797 NA non-coding downstream 10016 4095696 ~ 4096869 (+)
G106814 NA non-coding downstream 52133 4137813 ~ 4138496 (+)
G106831 NA non-coding downstream 82040 4167720 ~ 4168317 (+)
G106806 NA non-coding downstream 101138 4186818 ~ 4189033 (+)
G106841 NA non-coding downstream 119760 4205440 ~ 4206012 (+)
G106775 NA other upstream 38398 4027075 ~ 4027594 (+)
G106575 NA other upstream 265640 3639434 ~ 3800352 (+)
G106595 NA other upstream 388142 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 674959 3006312 ~ 3391033 (+)
G107922 NA other downstream 658488 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 723059 4808739 ~ 4811575 (+)
G108048 NA other downstream 772231 4857911 ~ 4858274 (+)
G108280 NA other downstream 1050676 5136356 ~ 5136992 (+)

Expression


Co-expression Network