LOC118944032


Basic Information

Item Value
gene id LOC118944032
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5142929 ~ 5164600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961544.1
ATGTTCCATGCTGTTGGCCTGGTGGTCAGGGCTCTGGACTGTGCTGCTGTGGCGTGTCAGGCTGGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCAGGCTGGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCAGGCTGGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCAGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCAGGCTGGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCTGGCTCGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCTGGCTCGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCTGGCTCGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCTGGCTGGGCGTCTTATCCCTGTGCTGCTGTGGCGTGTCTGGCTGGCCCTTCCACCACACCGTCACTACAGCCCTTCCATCACTACAGCCCTTCCACCACACCGTCACTACAGCCCTTCGACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCATCACATCGTCACTACAGCCCTTCCGTCACTACGGCCCTTCCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCATCACATCGTCACTACAGCCCTTCCGTCACTACGGCCCTTCCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCGTCACTACGGCCCTTCCGTCACTACAGCCCTTCCGTCACACCGTCATTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCGTCACTACGGCCCTTCCGTCACTACAGCCCTTCCGTCACTACAGCCCTTCCGTCACTACAGCCCTTCCGTCACTACAGCCCTTCCGTCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACCGTCACTACGGCCCTTCCACCACACTGTCACTACAGCCCTTCCACCACACCGTCCTTCCACCACACCGTCACTACAGCCCTTCCACCACACCGTCACTTCAGCCCTTCCATCACACCGTCACTACAGCCCTTCCATCACACCGTCACTACAGCCCTTCCATCACACCGTCACTACAGCCCTTCCATCACACCGTCACTACAGCCCTTCCACCACACCGTCACTACAGCCCTTCCACCACACCGTCACTACGGCCCTTCTACCACACCGTCACTACAGCCCTTCCACCACTACAGCCCTTCCACCACTACAGCAACTTCCAACACACCGTCACTACAGCCCTTCCATCACTACAGCCCTTCCATCACTACAGCCCTTCCATCACTACAACCCTTCCATCACTACAACCCTTCCACCACACCGTCACTACAGCCCTTCCACCACACCGTCACTACAGCCCTTCCACCACTACAGCCCTTCCACCACTACAGCAACTTCCAACACACCGACTGTTATCCCCACACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCCTGAGAAGGACTGTTATCCCCCCACTGCCCACTAG

Function

NR:

description
PREDICTED: skin secretory protein xP2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961544.1 True 2427 mRNA 0.61 4 5142929 5164600

Neighbor

gene id symbol gene type direction distance location
LOC118936926 LOC106594463 coding downstream 74817 5066972 ~ 5068112 (-)
has2 LOC106592862 coding downstream 301527 4808713 ~ 4841402 (-)
sntb1 LOC106595750 coding downstream 402831 4662333 ~ 4740098 (-)
mrpl13 LOC106606163 coding downstream 540132 4575437 ~ 4602797 (-)
dscc1 LOC106595460 coding downstream 906137 4227282 ~ 4236792 (-)
derl1 derl1 coding upstream 15988 5180588 ~ 5195460 (-)
zgc:101716 LOC106594901 coding upstream 71325 5235925 ~ 5238087 (-)
LOC110520807 LOC106594904 coding upstream 77365 5241965 ~ 5248382 (-)
LOC110520837 LOC100380869 coding upstream 83879 5248479 ~ 5262214 (-)
LOC110507251 LOC106595421 coding upstream 103532 5268132 ~ 5274197 (-)
G108429 NA non-coding downstream 4302 5138250 ~ 5138627 (-)
G108425 NA non-coding downstream 13783 5125194 ~ 5129146 (-)
G108412 NA non-coding downstream 44665 5097855 ~ 5098264 (-)
G108404 NA non-coding downstream 54540 5088100 ~ 5088389 (-)
G108384 NA non-coding downstream 90101 5052381 ~ 5052828 (-)
G108468 NA non-coding upstream 41921 5206521 ~ 5206966 (-)
G108473 NA non-coding upstream 73593 5238193 ~ 5240343 (-)
G108511 NA non-coding upstream 173413 5338013 ~ 5349664 (-)
G108517 NA non-coding upstream 188900 5353500 ~ 5353758 (-)
G108522 NA non-coding upstream 193449 5358049 ~ 5359185 (-)
G108033 NA other downstream 298838 4843061 ~ 4844091 (-)
G107849 NA other downstream 590964 4550313 ~ 4551965 (-)
G107843 NA other downstream 603306 4539235 ~ 4539623 (-)
G107755 NA other downstream 766506 4375922 ~ 4376423 (-)
G107576 NA other downstream 842699 4297445 ~ 4302456 (-)
G108477 NA other upstream 76018 5240618 ~ 5241664 (-)
LOC110520858 LOC106606136 other upstream 257897 5422229 ~ 5430785 (-)
G109302 NA other upstream 673077 5837677 ~ 5840273 (-)
atxn1b LOC106597954 other upstream 696969 5860711 ~ 5875088 (-)
G109273 LOC106606171 other upstream 718382 5882982 ~ 5886155 (-)

Expression


Co-expression Network