zgc:101716 (LOC106594901)


Basic Information

Item Value
gene id zgc:101716
gene name LOC106594901
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5235925 ~ 5238087 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598299.2
TTCTGTTTCCCAACGGTCATATTAGCTTGTAACACTGCACACGTTgacgtttgttttgttttttagtgTTGGTAAAATCTGAATTCGCTGTCATTCATCGTTTGAAATGGAGATTTTCGGTAGCACCTTTGACGATTCGGTGTTCGAGGAATCAAGAGCGAAGCCGACTGTTGTTGCACTGTCGACTTACAATGCAAAGTTCTGTGAAGCAGAGTGGTTTTGGGAGAGCATCGACACAGAGGACATTTTGGAGGTGCAAAAGATCTTCAAATTTCGAGCTGATATGGCATACAGGCGAAAAAACTTCCAGGAAGCTTTAAACGCCTACACTACCTGCCTCTCCTATATCCCTGACGGCAACCTGGCCATTAGACGGGACATAATGGAGGGAATGGCAAGGTGCTGTTGTCACCTGGGGAAGAGAGTGGAGGCCCTGGAGATCACAGAAACACTTAAAAATGAAGCCTCCAACACCTGTCACCTTACCGGTTTACTTCACCTGACTGCGAACGTCCACGAGCGCTTCGGAGACCTCAGGAGCCAGGTCACGTGTCTGCAGCAGCTGTGTTCTCTCCACCCCTACCACCAGTGGCACTGGATGAAGCTGGCAGAAAGCTACCTTCATCTTCTTCAGTCTCTGTCAACACCCTCAGGCTCCAGTCCTCTTCAACAGGGAGATGGTGTAGAGCCACAGCCTGACTCTCAGACTGAGGAGCAACTGAAGGAAGAGCGTGACGGCGTTTGGCTCAAGGCCTGCATGTGTTTTGTCCGGGCCAGACTCCTCCTCAGGGCATTAAAGGGCCAACAGTCATCCTTTGTTCTCCAGAACAGTGAGAGAGCCCTACAGAAGGCTGATCAGGCTCTACGTTGGCTGGAACTGAAAGACACCACACTACAACTAGTCTCTGAGGTGATGTCAGGAGATCTAGTtccagagagaatgagagaggacaaCCAGGATGGAGAGAGCTCGGCAGGTCTCTCTCTGAAGGACTTTGAAGACAGGTGGTGGAACAGACTGGTACAGACAGGAGTACTGAAGGAGGATGGACCTAAAATACCCTCTGTAAAGACCAACTAGGCTACacattttaatgaatgtatttatttgttaATATTGCGTGTAACAATGTGCTGACGGCCATATGAAATGAAATATTGTCACAATCTACAGTCCAGTTTAATTAGATCATTGTTGTATTGAATTTCAAAGTAGAACCATTTGGAAAAA

Function

NR:

description
uncharacterized protein C8orf76-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598299.2 True 1231 mRNA 0.47 6 5235925 5238087

Neighbor

gene id symbol gene type direction distance location
derl1 derl1 coding downstream 40465 5180588 ~ 5195460 (-)
LOC118944032 NA coding downstream 71325 5142929 ~ 5164600 (-)
LOC118936926 LOC106594463 coding downstream 167813 5066972 ~ 5068112 (-)
has2 LOC106592862 coding downstream 394523 4808713 ~ 4841402 (-)
sntb1 LOC106595750 coding downstream 495827 4662333 ~ 4740098 (-)
LOC110520807 LOC106594904 coding upstream 3878 5241965 ~ 5248382 (-)
LOC110520837 LOC100380869 coding upstream 10392 5248479 ~ 5262214 (-)
LOC110507251 LOC106595421 coding upstream 30045 5268132 ~ 5274197 (-)
LOC110520755 LOC106595600 coding upstream 37536 5275623 ~ 5295898 (-)
LOC110520756 LOC106573122 coding upstream 58068 5296155 ~ 5306065 (-)
G108468 NA non-coding downstream 28959 5206521 ~ 5206966 (-)
G108436 NA non-coding downstream 83006 5151779 ~ 5152919 (-)
G108429 NA non-coding downstream 97298 5138250 ~ 5138627 (-)
G108425 NA non-coding downstream 106779 5125194 ~ 5129146 (-)
G108412 NA non-coding downstream 137661 5097855 ~ 5098264 (-)
G108473 NA non-coding upstream 106 5238193 ~ 5240343 (-)
G108511 NA non-coding upstream 99926 5338013 ~ 5349664 (-)
G108517 NA non-coding upstream 115413 5353500 ~ 5353758 (-)
G108522 NA non-coding upstream 119962 5358049 ~ 5359185 (-)
G108523 NA non-coding upstream 121610 5359697 ~ 5360054 (-)
G108033 NA other downstream 391834 4843061 ~ 4844091 (-)
G107849 NA other downstream 683960 4550313 ~ 4551965 (-)
G107843 NA other downstream 696302 4539235 ~ 4539623 (-)
G107755 NA other downstream 859502 4375922 ~ 4376423 (-)
G107576 NA other downstream 935695 4297445 ~ 4302456 (-)
G108477 NA other upstream 2531 5240618 ~ 5241664 (-)
LOC110520858 LOC106606136 other upstream 184410 5422229 ~ 5430785 (-)
G109302 NA other upstream 599590 5837677 ~ 5840273 (-)
atxn1b LOC106597954 other upstream 623482 5860711 ~ 5875088 (-)
G109273 LOC106606171 other upstream 644895 5882982 ~ 5886155 (-)

Expression


Co-expression Network