cep72 (LOC106573558)


Basic Information

Item Value
gene id cep72
gene name LOC106573558
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6286558 ~ 6312599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936209.1
AGGATGTGGGCGTTCCCAGACCGTAAACAACTGCGCATGCTCGGCTCGGCTTCCACCAAATTGGAAAAATATGGCGGCGCTGTTGACAACAGTAACAGAGCAGTGGATACGAGAGAAGCTACATCTAAATCACCATTGCCTTGCAGATGTGAGATCACTGAGCCTCCCAGGATCATACAAGGAGAAAATCAGACATCTGGGAATCTCACTAAAGAACTTTGTCCGTTTGAAAACCCTGAACCTCTCCTGTAATGCACTAATCTCTGTCGAGGGGGTCCAACACTTGAAGAGGCTGGAGAGGCTGAACTTGTACTACAACAGCATTCCCTCCCTTCAGGAGGTCAAAGTGCTCTGGCAGCTGACTGctctgagagagctggacctgaggcTCAACCCTCTGGCTAAAACAGATCCACACTACCGCCTGTACTTTGTGCACGCACTGTCCAACCTTCGCAGGCTTGATGACTGTCCAGTCAGGGACAGTGAGAGAAGAGCTTCAATCATGCATTTCTCCTCAGACTCTGTGCTCGGACCCCAACAGACGAGCTCCTCGGAGACAGACATCACTGACCAgagGGGCAGTAAGCTGAGGATGGCCTCAGTAAATCGCCTGGCCAAGAAGCTCTCTGTCCTGGATGACAACGATGACATAGTGTTGAACCTTGTCGCTAAGAGCAACTGGGACCAAAGTGAACCTCTGTTCCTGACTGGCTCCTCCCACAAGGAGCCAGAGTCCCAGCTCTATCATCAGATCAACGAGGAGTCTTGTCATTCCCAGTCCAATGGTCAACGTTTAAGAGAAGGATCTCGAAGGAAAGGTTCTTCCTCCTCGTTGAAAACGTCAGAGGGGCCGAGGGTAACCTTTAACCCCCGCGTAGAGAAACACAGCGGGACTAGCTCTGGACGGGAGGAgcgagagaaactccccaaacacctGAGAGTCACAGCCAAGGGCTACTTCACCCCTCACCCTGATAAAGTTGACCAGCAGAAGTCTTCCTTAGTGAAGATCCGCCCCCCTAGTCCAAGAAGTCCCTGTCCCAGTAGGTCTGATGCCACCAACCCCATCCTGCACCCTCCCAGACTGTCCTACCATAACACCCAGCAGACAGCAGGGGGCTCCACCTCACCACAGAAACAAGCCAAGCAACAGAAGGGAAGCTATAGGAAACCAATGGAGATGCTGCTGAGCCTAGTGAACAAGCACTGGACAGGGGAGAGGCCTCTGCACCATGACAACAACTTCCTCTCTCAGGCAGTCCAGATCCTGTCCATGATGGAACGAGACGTCTCCAGTGGAGAAGCCGAGGTCAGGACGTTGAGAGGGAACGTTGAAGAGCTGAAGGAGCAGGCAGAGATACGAGACCAAGACCACAGGACAGAGACCCATAGACTAACTACACAGCTGGAGGAAGCACACATGTCTGTTgACAGTTTGAATGAGCAGCTGAGGATACTATTGGAGGATAACGTCTCTCTACAGAAGCAGATGATCAGATTAGAGAAACAATATCTCAACTCTATGATGAAAAGTTCACCCGACACTGAGATATGTGagaaacaggcagaggtGGATGAGCTGAGGAAGAAGGTATCAGAGCTGAGGGAGAAGgttgaggagggggagagagtcaaGGAGCTGGCAGGTATGCTGCAGGAGAACCATAGGTCACTGGTTGCAACTAATGAGCATTTGCTGAGTGAATTGGAGGAGACTAGGAGTAGACTGTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACAACTCTGAGGAGCTACACATCACAACTACAACAACTAGAGAACCTGAGGAGACTAGGAGACGACTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGACAGCTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGCCGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTCGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGATGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGCAGGCCCACAACTACAACACCAGGGCCACATTCCGTAGGTAAACGTTATGGAACATTGCAAATAGAAATGTCATGAATAGAGCCAATTCCTTACTCTACATGATGTCAGAGAGGAATGTTTGTtctacatttctatctgaacgttccagAACGTTGTCCTGCTGAACGAGCACCAGCACCAGATTCTCTTATTTTAGCTCTATATACACTGCTGCCAACATTTACACTGTTCTTCTGATGCTCCGGGATGAATGTTGAGCAGGTAAACTGGTCTCTAACTCTGATCTCATGTTTTACTTCTGTGTATCGACATGGTTTTACTGTGTCCACTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACGCTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGCACATTGAGTCTCAATATTTATGACTCTAGACATGTTTAAATGATAAAGTATTTATTGTGTTCACGCTGT
>XM_036936220.1
AGGATGTGGGCGTTCCCAGACCGTAAACAACTGCGCATGCTCGGCTCGGCTTCCACCAAATTGGAAAAATATGGCGGCGCTGTTGACAACAGTAACAGAGCAGTGGATACGAGAGAAGCTACATCTAAATCACCATTGCCTTGCAGATGTGAGATCACTGAGCCTCCCAGGATCATACAAGGAGAAAATCAGACATCTGGGAATCTCACTAAAGAACTTTGTCCGTTTGAAAACCCTGAACCTCTCCTGTAATGCACTAATCTCTGTCGAGGGGGTCCAACACTTGAAGAGGCTGGAGAGGCTGAACTTGTACTACAACAGCATTCCCTCCCTTCAGGAGGTCAAAGTGCTCTGGCAGCTGACTGctctgagagagctggacctgaggcTCAACCCTCTGGCTAAAACAGATCCACACTACCGCCTGTACTTTGTGCACGCACTGTCCAACCTTCGCAGGCTTGACTCTGTGCTCGGACCCCAACAGACGAGCTCCTCGGAGACAGACATCACTGACCAgagGGGCAGTAAGCTGAGGATGGCCTCAGTAAATCGCCTGGCCAAGAAGCTCTCTGTCCTGGATGACAACGATGACATAGTGTTGAACCTTGTCGCTAAGAGCAACTGGGACCAAAGTGAACCTCTGTTCCTGACTGGCTCCTCCCACAAGGAGCCAGAGTCCCAGCTCTATCATCAGATCAACGAGGAGTCTTGTCATTCCCAGTCCAATGGTCAACGTTTAAGAGAAGGATCTCGAAGGAAAGGTTCTTCCTCCTCGTTGAAAACGTCAGAGGGGCCGAGGGTAACCTTTAACCCCCGCGTAGAGAAACACAGCGGGACTAGCTCTGGACGGGAGGAgcgagagaaactccccaaacacctGAGAGTCACAGCCAAGGGCTACTTCACCCCTCACCCTGATAAAGTTGACCAGCAGAAGTCTTCCTTAGTGAAGATCCGCCCCCCTAGTCCAAGAAGTCCCTGTCCCAGTAGGTCTGATGCCACCAACCCCATCCTGCACCCTCCCAGACTGTCCTACCATAACACCCAGCAGACAGCAGGGGGCTCCACCTCACCACAGAAACAAGCCAAGCAACAGAAGGGAAGCTATAGGAAACCAATGGAGATGCTGCTGAGCCTAGTGAACAAGCACTGGACAGGGGAGAGGCCTCTGCACCATGACAACAACTTCCTCTCTCAGGCAGTCCAGATCCTGTCCATGATGGAACGAGACGTCTCCAGTGGAGAAGCCGAGGTCAGGACGTTGAGAGGGAACGTTGAAGAGCTGAAGGAGCAGGCAGAGATACGAGACCAAGACCACAGGACAGAGACCCATAGACTAACTACACAGCTGGAGGAAGCACACATGTCTGTTgACAGTTTGAATGAGCAGCTGAGGATACTATTGGAGGATAACGTCTCTCTACAGAAGCAGATGATCAGATTAGAGAAACAATATCTCAACTCTATGATGAAAAGTTCACCCGACACTGAGATATGTGagaaacaggcagaggtGGATGAGCTGAGGAAGAAGGTATCAGAGCTGAGGGAGAAGgttgaggagggggagagagtcaaGGAGCTGGCAGGTATGCTGCAGGAGAACCATAGGTCACTGGTTGCAACTAATGAGCATTTGCTGAGTGAATTGGAGGAGACTAGGAGTAGACTGTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACAACTCTGAGGAGCTACACATCACAACTACAACAACTAGAGAACCTGAGGAGACTAGGAGACGACTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGACAGCTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGCCGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTCGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGATGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGCAGGCCCACAACTACAACACCAGGGCCACATTCCGTAGGTAAACGTTATGGAACATTGCAAATAGAAATGTCATGAATAGAGCCAATTCCTTACTCTACATGATGTCAGAGAGGAATGTTTGTtctacatttctatctgaacgttccagAACGTTGTCCTGCTGAACGAGCACCAGCACCAGATTCTCTTATTTTAGCTCTATATACACTGCTGCCAACATTTACACTGTTCTTCTGATGCTCCGGGATGAATGTTGAGCAGGTAAACTGGTCTCTAACTCTGATCTCATGTTTTACTTCTGTGTATCGACATGGTTTTACTGTGTCCACTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACGCTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGCACATTGAGTCTCAATATTTATGACTCTAGACATGTTTAAATGATAAAGTATTTATTGTGTTCACGCTGT
>XM_036936215.1
CACCAAATTGGAAAAATATGGCGGCGCTGTTGACAACAGTAACAGAGCAGTGGATACGAGAGAAGCTACATCTAAATCACCATTGCCTTGATGTGAGATCACTGAGCCTCCCAGGATCATACAAGGAGAAAATCAGACATCTGGGAATCTCACTAAAGAACTTTGTCCGTTTGAAAACCCTGAACCTCTCCTGTAATGCACTAATCTCTGTCGAGGGGGTCCAACACTTGAAGAGGCTGGAGAGGCTGAACTTGTACTACAACAGCATTCCCTCCCTTCAGGAGGTCAAAGTGCTCTGGCAGCTGACTGctctgagagagctggacctgaggcTCAACCCTCTGGCTAAAACAGATCCACACTACCGCCTGTACTTTGTGCACGCACTGTCCAACCTTCGCAGGCTTGATGACTGTCCAGTCAGGGACAGTGAGAGAAGAGCTTCAATCATGCATTTCTCCTCAGACTCTGTGCTCGGACCCCAACAGACGAGCTCCTCGGAGACAGACATCACTGACCAgagGGGCAGTAAGCTGAGGATGGCCTCAGTAAATCGCCTGGCCAAGAAGCTCTCTGTCCTGGATGACAACGATGACATAGTGTTGAACCTTGTCGCTAAGAGCAACTGGGACCAAAGTGAACCTCTGTTCCTGACTGGCTCCTCCCACAAGGAGCCAGAGTCCCAGCTCTATCATCAGATCAACGAGGAGTCTTGTCATTCCCAGTCCAATGGTCAACGTTTAAGAGAAGGATCTCGAAGGAAAGGTTCTTCCTCCTCGTTGAAAACGTCAGAGGGGCCGAGGGTAACCTTTAACCCCCGCGTAGAGAAACACAGCGGGACTAGCTCTGGACGGGAGGAgcgagagaaactccccaaacacctGAGAGTCACAGCCAAGGGCTACTTCACCCCTCACCCTGATAAAGTTGACCAGCAGAAGTCTTCCTTAGTGAAGATCCGCCCCCCTAGTCCAAGAAGTCCCTGTCCCAGTAGGTCTGATGCCACCAACCCCATCCTGCACCCTCCCAGACTGTCCTACCATAACACCCAGCAGACAGCAGGGGGCTCCACCTCACCACAGAAACAAGCCAAGCAACAGAAGGGAAGCTATAGGAAACCAATGGAGATGCTGCTGAGCCTAGTGAACAAGCACTGGACAGGGGAGAGGCCTCTGCACCATGACAACAACTTCCTCTCTCAGGCAGTCCAGATCCTGTCCATGATGGAACGAGACGTCTCCAGTGGAGAAGCCGAGGTCAGGACGTTGAGAGGGAACGTTGAAGAGCTGAAGGAGCAGGCAGAGATACGAGACCAAGACCACAGGACAGAGACCCATAGACTAACTACACAGCTGGAGGAAGCACACATGTCTGTTgACAGTTTGAATGAGCAGCTGAGGATACTATTGGAGGATAACGTCTCTCTACAGAAGCAGATGATCAGATTAGAGAAACAATATCTCAACTCTATGATGAAAAGTTCACCCGACACTGAGATATGTGagaaacaggcagaggtGGATGAGCTGAGGAAGAAGGTATCAGAGCTGAGGGAGAAGgttgaggagggggagagagtcaaGGAGCTGGCAGGTATGCTGCAGGAGAACCATAGGTCACTGGTTGCAACTAATGAGCATTTGCTGAGTGAATTGGAGGAGACTAGGAGTAGACTGTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACAACTCTGAGGAGCTACACATCACAACTACAACAACTAGAGAACCTGAGGAGACTAGGAGACGACTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGACAGCTCTGAGGAGCTACACATCACAACAACTAGAGAACTGGAGGAGACTAGGAGCCGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTCGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGATGACTCTGAGGAGCTACACGTCACAACTACAACAACTAGAGAACTGGAGGAGACTAGGAGACGGCTCTGAGGAGCTACACGTCACAACTACAACAACTAGCAGGCCCACAACTACAACACCAGGGCCACATTCCGTAGGTAAACGTTATGGAACATTGCAAATAGAAATGTCATGAATAGAGCCAATTCCTTACTCTACATGATGTCAGAGAGGAATGTTTGTtctacatttctatctgaacgttccagAACGTTGTCCTGCTGAACGAGCACCAGCACCAGATTCTCTTATTTTAGCTCTATATACACTGCTGCCAACATTTACACTGTTCTTCTGATGCTCCGGGATGAATGTTGAGCAGGTAAACTGGTCTCTAACTCTGATCTCATGTTTTACTTCTGTGTATCGACATGGTTTTACTGTGTCCACTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACGCTGTTCCTTACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTGACTGACTGTATCCACACCTTTACACTGTTCCTTACTGACTGTATCCACACCTTTACACTGCACATTGAGTCTCAATATTTATGACTCTAGACATGTTTAAATGATAAAGTATTTATTGTGTTCACGCTGT

Function

NR:

description
centrosomal protein of 72 kDa-like

GO: NA

KEGG:

id description
K16532 CEP72; centrosomal protein CEP72

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936209.1 False 3239 mRNA 0.49 12 6286558 6312599
XM_036936220.1 False 3182 mRNA 0.49 12 6286558 6312599
XM_036936215.1 True 3183 mRNA 0.48 12 6286611 6312599

Neighbor

gene id symbol gene type direction distance location
ccdc12 ccd12 coding upstream 36516 6231369 ~ 6250042 (+)
LOC118937376 NA coding upstream 192618 6092079 ~ 6093940 (+)
setd2 LOC106593284 coding upstream 237057 6002992 ~ 6049501 (+)
LOC110505679 LOC106579367 coding upstream 284293 5976200 ~ 6002265 (+)
LOC118937375 NA coding upstream 306668 5978266 ~ 5979890 (+)
trip13 LOC106590995 coding downstream 65774 6378373 ~ 6389788 (+)
nkd2b LOC106574162 coding downstream 90077 6402676 ~ 6499698 (+)
zgc:158766 LOC106590969 coding downstream 232769 6545368 ~ 6629469 (+)
LOC118937387 NA coding downstream 306511 6619110 ~ 6621596 (+)
LOC110505995 LOC106573077 coding downstream 332617 6645216 ~ 6649794 (+)
G108876 NA non-coding upstream 4660 6281550 ~ 6281898 (+)
G108872 NA non-coding upstream 6519 6279261 ~ 6280039 (+)
G108861 NA non-coding upstream 20076 6265941 ~ 6266482 (+)
G108845 NA non-coding upstream 57205 6229118 ~ 6229353 (+)
G108844 NA non-coding upstream 57811 6228409 ~ 6228747 (+)
G108873 NA non-coding downstream 2000 6314599 ~ 6318260 (+)
G108887 NA non-coding downstream 19430 6332029 ~ 6333259 (+)
G108888 NA non-coding downstream 21498 6334097 ~ 6344523 (+)
G108897 NA non-coding downstream 50305 6362904 ~ 6364789 (+)
G108911 NA non-coding downstream 73731 6386330 ~ 6386720 (+)
G108874 LOC106573552 other upstream 618 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 87217 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 228223 6056996 ~ 6058335 (+)
LOC110505637 LOC106573538 other upstream 327745 5953886 ~ 5958813 (+)
G109020 NA other downstream 320479 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 543487 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 595948 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 628917 6941465 ~ 6944043 (+)
G109821 NA other downstream 822648 7135247 ~ 7140979 (+)

Expression


Co-expression Network