LOC118937387


Basic Information

Item Value
gene id LOC118937387
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6619110 ~ 6621596 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936309.1
TGTCGCTACGATATGTTATGATAACCTAATTTGCCTGGAAATTATTTTTATGAGGTTAGCATACAAAATCCACAAAATaaatctctctctatcactccctctcactctctctctctctttctttgtttctctctgtttgcTGAATGTGACTttcaacaacatgtctgccaaTGCAGCTGCTGATGAGAAAGGCTGATTTGTAAATGCTCTCTCTGCCAGGATACGGGTGCGTTGTCAAGTTGACTGAATCAAAACACAACATCCCAACATCTCAGAGCAcatctcccctgttctcctcctttAAACCCTTGAGATGTTCTGTTCCAGCTGAAATATCCTCTCAGAGTCTACATCTACACTCCTACTCCACCAGACAGCTGTTGTGTACTGACACAGTGTCCTGTTAGCAGGAATGAGGTTGTCTGGACTTGTGTCTGTCGCAGGTGATTTGTTGCATGTCAGATATCAAAGGATGTTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGGGGAGTCAGAGCTGAAGTTAAAGCAGCagatggagtcagagctgaagTTAATGCAGCAGGTGGGGTCAGAGCTGAAGTTAATGCAGCagatggagtcagagctgaagTTAATGCAGCagatggagtcagagctgaagTTAATGCAGCAGGTGGGGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCagatggagtcagagctgaagTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCagatggagtcagagctgaagTTAATGCAGCagatggagtcagagctgaagTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAAAGCAGCAGAGGGAGTCAGAACTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCTGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCTGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCTGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCTGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGGGGAGTCAGAGCTGAAGTTAATGCTGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCTGCAGGTGGAGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGGGGGAGTCAGAGCTGAAGTTAATGCAGCAGGTGGAGTCAGAGCTGAAGTTAAAGCAGCAGGTGGAGTCAGAGCTGAAGTTAATGCAGCAGAGGGAGTCAGAACTGAAGTTTTGTGATTTTGTACACAAAgaatacaaaacaaacacaatGAACTCAAACACTAGACACAATGTAGCATCAACTCAAACACTAGACACAATGTAGTATCAACTCAAACACTAGACACAATGTAGCATCAACTCAAACACTAGACACAATGTAGCATCAACTCAAACACTAGACACAATGTAACATGTACAGCTCAGATAAGACAAACAAGAGGAAGAATAGGAACGTGCTCTGCATTACCCCATGCTAGACTGACTGTCTGGCTAGtgtactgtcctctcctctaacgTTACCTCACTGACAATGTTGTGTGTATACTCTTCAGAACTGTGTTCTATGGTTGTCCCGGAGTAGCCTGATACCTCCTGTATTCTGTGGTTGTCCCGAGTAGCCTGAAACCTCCTGTATTCTGTGGTTGTCCCGGAGTAGCCTGATACCTCCTGTATTCTGTGGTTGTCCCGGAGTAGCCTCATACCTCCTGTATTCTGTGGTTGTCCCGGAGTAGCCTCATACCTCCTTCCACGGAGACATGATCCATAGATAGAAATGTGTACAGTGAAATGTTCATGTTCTCTACCcaatctttccttctctcc

Function

NR:

description
ribosome-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936309.1 True 2487 mRNA 0.47 1 6619110 6621596

Neighbor

gene id symbol gene type direction distance location
nkd2b LOC106574162 coding upstream 119412 6402676 ~ 6499698 (+)
trip13 LOC106590995 coding upstream 229322 6378373 ~ 6389788 (+)
cep72 LOC106573558 coding upstream 306511 6286558 ~ 6312599 (+)
ccdc12 ccd12 coding upstream 369068 6231369 ~ 6250042 (+)
LOC118937376 NA coding upstream 525170 6092079 ~ 6093940 (+)
LOC110505995 LOC106573077 coding downstream 23620 6645216 ~ 6649794 (+)
ptdss1a LOC106595791 coding downstream 31606 6653202 ~ 6684816 (+)
LOC110505984 LOC106574154 coding downstream 64304 6685900 ~ 6688012 (+)
kif13a kif13a coding downstream 67295 6688891 ~ 6839464 (+)
LOC110506079 NA coding downstream 219436 6841032 ~ 6842093 (+)
G109015 NA non-coding upstream 18944 6598923 ~ 6600166 (+)
G109011 NA non-coding upstream 30482 6588164 ~ 6588628 (+)
G109003 NA non-coding upstream 46980 6571618 ~ 6572130 (+)
G108994 NA non-coding upstream 59603 6558895 ~ 6559507 (+)
G108951 NA non-coding upstream 147135 6464756 ~ 6471975 (+)
G109018 NA non-coding downstream 2074 6623670 ~ 6624211 (+)
G109019 NA non-coding downstream 3360 6624956 ~ 6626013 (+)
G109030 NA non-coding downstream 41673 6663269 ~ 6664730 (+)
G109032 NA non-coding downstream 49102 6670698 ~ 6672100 (+)
G108874 LOC106573552 other upstream 333170 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 419769 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 560775 6056996 ~ 6058335 (+)
LOC110505679 LOC106579367 other upstream 616916 5976200 ~ 6002265 (+)
LOC110505637 LOC106573538 other upstream 660297 5953886 ~ 5958813 (+)
G109020 NA other downstream 11482 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 234490 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 286951 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 319920 6941465 ~ 6944043 (+)
G109821 NA other downstream 513651 7135247 ~ 7140979 (+)

Expression


Co-expression Network