rbm24b (LOC106596654)


Basic Information

Item Value
gene id rbm24b
gene name LOC106596654
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6855864 ~ 6868976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936433.1
TCCAAAGCAATGTCAGACAGACGTGTTGTTATTTTGGGTTCTGTATTGAAATGAGCTAATGTATCGCGATCCTATGATCGAGGTCTGTTCATGTTTGGTCGGTGCCTGTGACCCCGTATGCCACAGTGGGAGGGCCCAGGAGAGAGCGTGTTCACGGCCCAGCCCCCTTGACGTGACAGCTGGGCGAAGCGGACTTAGACAGCAGTGGTATCCCTCTCCTATGTTAAGCAGTGTCAAACTGAACTGAAGTTGGGAACGATTGGAAATCCGCGTGAAACAAGTGTCTGTTCAGTTCCAACGAAACCTATCTTAAATTAATCGTTCTAAATAACCTGTGCTTTCGCAGAGCTGACTGATCTCTGTGAGATTGCAAAAACATTCTCTATAAAACATTGTTGCCTACTGTTTACCGCAAAAATGATGATGCACTCGTCTCAGAAGGACACAACCTACACAAAGATATTTGTAGGAGGTCTTCCATATCACACCACGGACTCCAGTCTCAGGAAATACTTCGAAGTGTTCGGTGATATCGACGAGGCTGTTGTTataacggacagacagacgggcaaaTCCAGAGGTTATGGATTCGTGACGATGGCAGACCGGGCGTCTGCGGACCGAGCCTGCAAGGACCCAAACCCCATCATCGACGGCCGGAAAGCCAATGTGAACCTGGCCTACCTGGGGGCCAAGCCCAGGGTCATGCAGCCAGGTGAGGGGATGGACGCGCTGGCGGAGGGCTGCGCCACACGTTTATTTCACAGCTTGGACGACCAAGGTTTCTCATTTGGTGTTCCTCAAATCCATCCAGCGTTCATCCAGAGGCCTTATGGGCTGGCTTACGGGATCCCAGCCCACTATGTCTACCCCCAGGCCTTTATGCAGCCAAGCACCATGGTCATCCCTCACAGCATGCAGTCGCCCGCCGCCACGGCCTCCGCCGCCTCCTCCCCGTACCTCGACTACACCGGAGCGGCCTACGCCCAGTACTCCGCCGCAGCCGCCAGCGCCGCGGCCGCCGCTGCCTACGAGCATTACCCGTACGCAGCCTCCCCGGCCCCTGCGGGCTACATGGCTGCAGCAGGGTATGGGTATGCGGTCCAGCAGCCCCTAGCAGCCGCAGCCACCCCGGGAGCAGCCGCAGCAGCTGCAGCCTTCGCCCAGTACCAGCCTCAGCAGCTTCAGGCAGACCGCATGCAgtaactgaccacaactactactattactgagCCTGGATAACAGAAGAGAAGAGGctatagagaggagggaggagggtataCTCACCCCCAGGACACTAcaaggggagaggtggggggagagtgtgaggaggggggagggatgaAGAGTGGAGTGTAGTGGTGGTCGTCAATCCTTGGCTTTAGAACATGCAGCGCTGCTACCAAAAGAGCCGGAAGAGAATCATCTCATAACTGAATAGAATTGTCTCATAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCGTCTCATAACTGAA
>XM_036936441.1
TCAGACAGACGTGTTGTTATTTTGGGTTCTGTATTGAAATGAGCTAATGTATCGCGATCCTATGATCGAGGTCTGTTCATGTTTGGTCGGTGCCTGTGACCCCGTATGCCACAGTGGGAGGGCCCAGGAGAGAGCGTGTTCACGGCCCAGCCCCCTTGACGTGACAGCTGGGCGAAGCGGACTTAGACAGCAGTGGTATCCCTCTCCTATGTTAAGCAGTGTCAAACTGAACTGAAGTTGGGAACGATTGGAAATCCGCGTGAAACAAGTGTCTGTTCAGTTCCAACGAAACCTATCTTAAATTAATCGTTCTAAATAACCTGTGCTTTCGCAGAGCTGACTGATCTCTGTGAGATTGCAAAAACATTCTCTATAAAACATTGTTGCCTACTGTTTACCGCAAAAATGATGATGCACTCGTCTCAGAAGGACACAACCTACACAAAGATATTTGTAGGAGGTCTTCCATATCACACCACGGACTCCAGTCTCAGGAAATACTTCGAAGTGTTCGGTGATATCGACGAGGCTGTTGTTataacggacagacagacgggcaaaTCCAGAGGTTATGGATTCGTGACGATGGCAGACCGGGCGTCTGCGGACCGAGCCTGCAAGGACCCAAACCCCATCATCGACGGCCGGAAAGCCAATGTGAACCTGGCCTACCTGGGGGCCAAGCCCAGGGTCATGCAGCCAGGTGAGGGGATGGACGCGCTGGCGGAGGGCTGCGCCACACGTTTATTTCACAGCTTGGACGACCAAGGTTTCTCATTTGGTGTTCCTCAAATCCATCCAGCGTTCATCCAGAGGCCTTATGGGATCCCAGCCCACTATGTCTACCCCCAGGCCTTTATGCAGCCAAGCACCATGGTCATCCCTCACAGCATGCAGTCGCCCGCCGCCACGGCCTCCGCCGCCTCCTCCCCGTACCTCGACTACACCGGAGCGGCCTACGCCCAGTACTCCGCCGCAGCCGCCAGCGCCGCGGCCGCCGCTGCCTACGAGCATTACCCGTACGCAGCCTCCCCGGCCCCTGCGGGCTACATGGCTGCAGCAGGGTATGGGTATGCGGTCCAGCAGCCCCTAGCAGCCGCAGCCACCCCGGGAGCAGCCGCAGCAGCTGCAGCCTTCGCCCAGTACCAGCCTCAGCAGCTTCAGGCAGACCGCATGCAgtaactgaccacaactactactattactgagCCTGGATAACAGAAGAGAAGAGGctatagagaggagggaggagggtataCTCACCCCCAGGACACTAcaaggggagaggtggggggagagtgtgaggaggggggagggatgaAGAGTGGAGTGTAGTGGTGGTCGTCAATCCTTGGCTTTAGAACATGCAGCGCTGCTACCAAAAGAGCCGGAAGAGAATCATCTCATAACTGAATAGAATTGTCTCATAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCGTCTCATAACTGAA
>XM_036936448.1
TATTTTGGGTTCTGTATTGAAATGAGCTAATGTATCGCGATCCTATGATCGAGGTCTGTTCATGTTTGGTCGGTGCCTGTGACCCCGTATGCCACAGTGGGAGGGCCCAGGAGAGAGCGTGTTCACGGCCCAGCCCCCTTGACGTGACAGCTGGGCGAAGCGGACTTAGACAGCAGTGGTATCCCTCTCCTATGTTAAGCAGTGTCAAACTGAACTGAAGTTGGGAACGATTGGAAATCCGCGTGAAACAAGTGTCTGTTCAGTTCCAACGAAACCTATCTTAAATTAATCGTTCTAAATAACCTGTGCTTTCGCAGAGCTGACTGATCTCTGTGAGATTGCAAAAACATTCTCTATAAAACATTGTTGCCTACTGTTTACCGCAAAAATGATGATGCACTCGTCTCAGAAGGACACAACCTACACAAAGATATTTGTAGGAGGTCTTCCATATCACACCACGGACTCCAGTCTCAGGAAATACTTCGAAGTGTTCGGTGATATCGACGAGGCTGTTGTTataacggacagacagacgggcaaaTCCAGAGGTTATGGATTCGTGACGATGGCAGACCGGGCGTCTGCGGACCGAGCCTGCAAGGACCCAAACCCCATCATCGACGGCCGGAAAGCCAATGTGAACCTGGCCTACCTGGGGGCCAAGCCCAGGGTCATGCAGCCAGGTTTCTCATTTGGTGTTCCTCAAATCCATCCAGCGTTCATCCAGAGGCCTTATGGGCTGGCTTACGGGATCCCAGCCCACTATGTCTACCCCCAGGCCTTTATGCAGCCAAGCACCATGGTCATCCCTCACAGCATGCAGTCGCCCGCCGCCACGGCCTCCGCCGCCTCCTCCCCGTACCTCGACTACACCGGAGCGGCCTACGCCCAGTACTCCGCCGCAGCCGCCAGCGCCGCGGCCGCCGCTGCCTACGAGCATTACCCGTACGCAGCCTCCCCGGCCCCTGCGGGCTACATGGCTGCAGCAGGGTATGGGTATGCGGTCCAGCAGCCCCTAGCAGCCGCAGCCACCCCGGGAGCAGCCGCAGCAGCTGCAGCCTTCGCCCAGTACCAGCCTCAGCAGCTTCAGGCAGACCGCATGCAgtaactgaccacaactactactattactgagCCTGGATAACAGAAGAGAAGAGGctatagagaggagggaggagggtataCTCACCCCCAGGACACTAcaaggggagaggtggggggagagtgtgaggaggggggagggatgaAGAGTGGAGTGTAGTGGTGGTCGTCAATCCTTGGCTTTAGAACATGCAGCGCTGCTACCAAAAGAGCCGGAAGAGAATCATCTCATAACTGAATAGAATTGTCTCATAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCGTCTCATAACTGAA
>XM_036936453.1
ATCCTATGATCGAGGTCTGTTCATGTTTGGTCGGTGCCTGTGACCCCGTATGCCACAGTGGGAGGGCCCAGGAGAGAGCGTGTTCACGGCCCAGCCCCCTTGACGTGACAGCTGGGCGAAGCGGACTTAGACAGCAGTGGTATCCCTCTCCTATGTTAAGCAGTGTCAAACTGAACTGAAGTTGGGAACGATTGGAAATCCGCGTGAAACAAGTGTCTGTTCAGTTCCAACGAAACCTATCTTAAATTAATCGTTCTAAATAACCTGTGCTTTCGCAGAGCTGACTGATCTCTGTGAGATTGCAAAAACATTCTCTATAAAACATTGTTGCCTACTGTTTACCGCAAAAATGATGATGCACTCGTCTCAGAAGGACACAACCTACACAAAGATATTTGTAGGAGGTCTTCCATATCACACCACGGACTCCAGTCTCAGGAAATACTTCGAAGTGTTCGGTGATATCGACGAGGCTGTTGTTataacggacagacagacgggcaaaTCCAGAGGTTATGGATTCGTGACGATGGCAGACCGGGCGTCTGCGGACCGAGCCTGCAAGGACCCAAACCCCATCATCGACGGCCGGAAAGCCAATGTGAACCTGGCCTACCTGGGGGCCAAGCCCAGGGTCATGCAGCCAGGTTTCTCATTTGGTGTTCCTCAAATCCATCCAGCGTTCATCCAGAGGCCTTATGGGATCCCAGCCCACTATGTCTACCCCCAGGCCTTTATGCAGCCAAGCACCATGGTCATCCCTCACAGCATGCAGTCGCCCGCCGCCACGGCCTCCGCCGCCTCCTCCCCGTACCTCGACTACACCGGAGCGGCCTACGCCCAGTACTCCGCCGCAGCCGCCAGCGCCGCGGCCGCCGCTGCCTACGAGCATTACCCGTACGCAGCCTCCCCGGCCCCTGCGGGCTACATGGCTGCAGCAGGGTATGGGTATGCGGTCCAGCAGCCCCTAGCAGCCGCAGCCACCCCGGGAGCAGCCGCAGCAGCTGCAGCCTTCGCCCAGTACCAGCCTCAGCAGCTTCAGGCAGACCGCATGCAgtaactgaccacaactactactattactgagCCTGGATAACAGAAGAGAAGAGGctatagagaggagggaggagggtataCTCACCCCCAGGACACTAcaaggggagaggtggggggagagtgtgaggaggggggagggatgaAGAGTGGAGTGTAGTGGTGGTCGTCAATCCTTGGCTTTAGAACATGCAGCGCTGCTACCAAAAGAGCCGGAAGAGAATCATCTCATAACTGAATAGAATTGTCTCATAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCGTCTCATAACTGAA
>TU124135
GTTAAGCAGTGTCAAACTGAACTGAAGTTGGGAACGATTGGAAATCCGCGTGAAACAAGTGTCTGTTCAGTTCCAACGAAACCTATCTTAAATTAATCGTTCTAAATAACCTGTGCTTTCGCAGAGCTGACTGATCTCTGTGAGATTGCAAAAACATTCTCTATAAAACATTGTTGCCTACTGTTTACCGCAAAAATGATGATGCACTCGTCTCAGAAGGACACAACCTACACAAAGATATTTGTAGGAGGTCTTCCATATCACACCACGGACTCCAGTCTCAGGAAATACTTCGAAGTGTTCGGTGATATCGACGAGGCTGTTGTTataacggacagacagacgggcaaaTCCAGAGGTTATGGATTCGTGACGATGGCAGACCGGGCGTCTGCGGACCGAGCCTGCAAGGACCCAAACCCCATCATCGACGGCCGGAAAGCCAATGTGAACCTGGCCTACCTGGGGGCCAAGCCCAGGGTCATGCAGCCAGGTTTCTCATTTGGTGTTCCTCAAATCCATCCAGCGTTCATCCAGAGGCCTTATGGGCTGGCTTACGGGTAAGAAACTGTATCTGATGGAGGGACATGATGGTTTGAGGATGAATAGCTGAATCTGCATTGGGCAGATCACTAACGTCTTACCAGTatactctgacacacacaaacaagctgaAATGGATCCCAGCCCACTATGTCTACCCCCAGGCCTTTATGCAGCCAAGCACCATGGTCATCCCTCACAGCATGCAGTCGCCCGCCGCCACGGCCTCCGCCGCCTCCTCCCCGTACCTCGACTACACCGGAGCGGCCTACGCCCAGTACTCCGCCGCAGCCGCCAGCGCCGCGGCCGCCGCTGCCTACGAGCATTACCCGTACGCAGCCTCCCCGGCCCCTGCGGGCTACATGGCTGCAGCAGGGTATGGGTATGCGGTCCAGCAGCCCCTAGCAGCCGCAGCCACCCCGGGAGCAGCCGCAGCAGCTGCAGCCTTCGCCCAGTACCAGCCTCAGCAGCTTCAGGCAGACCGCATGCAgtaactgaccacaactactactattactgagCCTGGATAACAGAAGAGAAGAGGctatagagaggagggaggagggtataCTCACCCCCAGGACACTAcaaggggagaggtggggggagagtgtgaggaggggggagggatgaAGAGTGGAGTGTAGTGGTGGTCGTCAATCCTTGGCTTTAGAACATGCAGCGCTGCTACCAAAAGAGCCGGAAGAGAATCATCTCATAACTGAATAGAATTGTCTCATAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCAAAACTGAAGAGAATCATCTCATAACTGAATAGAATCATCTCATAACTGAATAGAATCGTCTCATAACTGAATAGAATCGTCTCATAACTGAAGAGAATCATCTCATAACTGAAGAGAATCATCTCATAACTGAAGAGAATCATCTCATAACTGAAGAGAATCATCTCATAACTGAAGAGAATAGTTACTTCATTATTCAAATATCATCAGTGTTGTCATCACTAAattattgttttttgttgttgtcattatATCAGAAATATTTAATATTTATTCATCAGGACAAATATCTAGAATTATTATTTAAGATATGACCTCATAACCAACCTTTAAGTTTAAGTTAATAATTTTAAGCATATTTAATGTGTAGTAAATTAAATGTGTGATTTTGTACAACTGAAGTGCACTGAAGTCTAATCAGGTATTTTTCCCTCAAATTTCTTAAACAATGTAGATGGTCAAACCAAAAACACTTTTGGTCACTTTTCACCTTTTAATACTTTTAAACCTACATTTTGAACTATGCAATTTGAActtgtaaaatatatttagtgAAATATGTCttctacaaatatatatatatatatacagttgaagtcagaagtttacatacacttaggttggagtcattaaaactcgtttttcaaccactccacacatttcttgttaacaaactatagttttggcaagtcggttaggacagttactttgtgcatgacacaagtaatttttacaacaattgtttacagacagattatttcacttataattcactgtatcacaattccagtgggtcagaagtttacatacactaagttgactgtgcctggaaaattccagaaaattatgtcatggctttagaagcttctgataggctaattgacataatttgagtcgattggaggtgtacctgtggatgtatttcaaggcctaccttcaaactcagtgcctctttgcttgaaatcatgggaaaatcaaaagaaatcagccaagacctcagataaatatttttagacctccacaagtctggttcatccttgggagcaacttccaaatgcctgaaggtaccacgttcgtctgtacaaacaatagtacgcaagtataaacaccatgggaccacgtagcatcgtaccgctcaggaaggagacgtgttctgtctcctagagatgaacgtactttggtgcgaaaagtgaaaatcaatcccagaacaacagcaaaggaccctgtgaagatgctggaggaaacaagtacaaaagtatctatatccacactaaaacgagtccaatatcgacataacctgaaaggccactcaataagaaagaagtcactgctccaaaactgccataaaaaaagccagactacggtttgcaactgcacatggggacaagattgtactttttggagaaatgtcctctggtctgatgaaagaaaatagaactgtttggccataatgaccatcattatgtttggaggaaaaagggggatgcttgcaagctgaagaacaccatcccaaccgtgaagcacgggggtggcagcatcatgttgtgggggtgctttgctgcaggagggactggtgcacttcacaaaataaatggcatcatgaggaaggaaaatgatgtagCTAtaattgaagcaacatttcaaggcatcagtcaggaaattaaagcttggtcgcaaatgggtcttccaaatagacaatgaccccaagcatacttccaaagttgtggcaaaattacttaatgacaacaaagtcaaggtattggagtggccatcacaaagccttgacctcaatcccatagaaaaattgttggcagaactgaaaagcgtgtgcgagcaaggaggctttacaaacctgacttagttaaccagctctgtcagaaggaatgggccaaaattcacccaatttattgtgggaagcttgtggaaggctgccctaaatgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgaatgtaaacttctgacccactgggaatatgatgaaagaaataaaggctgaaataaatcattctctctgctatttttctgacatttctcattcttaaaataaagtggtgatcctaactaacctaagacagggacattttacttggattaaatgtcaggaattgtgaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttcagacttcaactgtatataataatgttaCTATAATAATGTTTGTACCTATGCAAAACAGTGGCGTAGAGGAGTGTTAGCTGTCTGTCCTGTGTTCCTATGGGGGTCAGATCAGATCCAGTGAGGGCAGGACAGAAGAGAACAGCTTCCTATGGGGGTCAGATCAGATCCAGTGAGGGCAGGACA

Function

NR:

description
PREDICTED: RNA-binding protein 24-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936433.1 False 1627 mRNA 0.53 5 6855864 6866600
XM_036936441.1 False 1603 mRNA 0.53 4 6855876 6866600
XM_036936448.1 False 1532 mRNA 0.52 5 6855893 6866600
XM_036936453.1 False 1481 mRNA 0.53 4 6855932 6866600
TU124135 True 3771 TUCP 0.43 6 6856086 6868976

Neighbor

gene id symbol gene type direction distance location
LOC110506079 NA coding upstream 13771 6841032 ~ 6842093 (+)
kif13a kif13a coding upstream 16400 6688891 ~ 6839464 (+)
LOC110505984 LOC106574154 coding upstream 167852 6685900 ~ 6688012 (+)
ptdss1a LOC106595791 coding upstream 171048 6653202 ~ 6684816 (+)
LOC110505995 LOC106573077 coding upstream 206070 6645216 ~ 6649794 (+)
grinab grina coding downstream 9387 6875987 ~ 6889713 (+)
LOC118937417 LOC106592634 coding downstream 24848 6891448 ~ 6896287 (+)
smpd5 LOC106577403 coding downstream 30898 6897498 ~ 6908200 (+)
malsu1 malsu1 coding downstream 41911 6908511 ~ 6911256 (+)
stk31 LOC106595692 coding downstream 45489 6912089 ~ 6938750 (+)
G109080 NA non-coding upstream 10934 6843876 ~ 6844930 (+)
G109072 NA non-coding upstream 42448 6812794 ~ 6813416 (+)
G108934 NA non-coding upstream 62685 6792011 ~ 6793179 (+)
G108930 NA non-coding upstream 101935 6709124 ~ 6753929 (+)
G109032 NA non-coding upstream 183764 6670698 ~ 6672100 (+)
G109069 NA non-coding downstream 3000 6869600 ~ 6870945 (+)
G109088 NA non-coding downstream 4911 6871511 ~ 6871727 (+)
G109092 NA non-coding downstream 12674 6879274 ~ 6879556 (+)
G109738 NA non-coding downstream 29823 6896423 ~ 6896670 (+)
G109739 NA non-coding downstream 37370 6903970 ~ 6904855 (+)
G109020 NA other upstream 221951 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 569924 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 656523 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 797529 6056996 ~ 6058335 (+)
LOC110505679 LOC106579367 other upstream 853670 5976200 ~ 6002265 (+)
LOC110535156 LOC106606167 other downstream 74916 6941465 ~ 6944043 (+)
G109821 NA other downstream 268647 7135247 ~ 7140979 (+)
pde11al LOC106573285 other downstream 436428 7282430 ~ 7304709 (+)
creb5b LOC106573409 other downstream 749359 7615910 ~ 7706660 (+)

Expression


Co-expression Network