pde11al (LOC106573285)


Basic Information

Item Value
gene id pde11al
gene name LOC106573285
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7282430 ~ 7304709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936692.1
GGGTCTTTTATTTTTTCCCCCGATGACTACTTTTGACTTCTCTGATGTGGAAGCGTTTTTGGACTGCCACCCGGACCTCTTTGAGGAGTATGTCGTGCGTAAAGGAAAATGCGATACGGTGAGCAGGTGGTTGAAGGACCAACAGCCGTCCAAAGTCTCCCTTGCGGACGAAAAGCGTGGCGGAGTGCCCAGGGACCCGCTCTGGCCGACCAACCCTGACGGTCTCCGGCGCCGCTCCTCCCACATGGAGCTCCGAAGGAACTTTGCCCGGTCCAAAGCCACCACCGCGCACAGAACCTACGACGAGCACGCCAGTCACAGGGAACACGATGATTCCCAGTCCAGCATGAGACGCCGCGCGTTACTGCGCAAAGCTAGTTCTTTGCCGCCAACCACCGGGCACATTCTGAGCGCCCTTCTCGAATCCAGGGTCAATGTGCCCCAGTACGCTTCCAGTGCCATCGACTACAAATACAGACTGAAGGAGACCAACGAGAGGGAGTTCTTCCTTGAGTTGGTGAAAGATGTCTCCAATGACCTGGACATGACCAACCTGAGTTATAAGATCCTAATCAATGTGTGTATCCTGGTGGATGCGGATAGGTGCTCGCTGTTTCTAGTTGAGGGACCATCTCACAAGAGAACGCTCGTGTCTAAGTTATTCGACGTGCACCTGGGCACCACGGTGCGACCCTCTTCCAGCACTCTGAACTCTAACGAGGTGCAGGTGCCGTGGGGAAAGGGCATTATCGGATACGTGGCAGAGCATGGGGAGACTGTAAACATACCCAACGCATATGAGGACCATCGGTTCAGTGACGAGATAGACAAGCTGACCGgctataagacccagtccatccTGTGTATGACCATCTGTAACAGTGATGGAGAGGTCATCGGGGTTGTGCAGGCCATCAACAAGAACCCAATCGGAACACCTTTTACGGAGGACGACGAGAAGGTGCTGCAGATGTATCTACCGTTCTGCGGAATATCCATCTCCAATGCCAAGTTGTTTTCAGAGTCTCGGAAGGAGTACGAGAGGAGCAGAGCTCTGCTAGAGGTGGTGAATGACCTGTTTGAGGAACAGACAGACCTGGAGAAGATAGTGAGGAAGATCATGCAGAGAGCTGTGACCCTGCTGCAGTGTGAAcgctgctctgtgttgctgctggaGGATATACACTCACCTGTGGTAAAGTTCTCAAAGACCTTTGAGCTCATGTCTCCCCTGTGCAACATGGACCGTGACATCAGCATGGAGAAGCTGTCCTGCTCTGATTGGCTGATCAATAACAGCATTGCTGAGCTGGTGGCGTCCACAGGACTGCCTGTCAACATCAGCGACGTCTGTCAGGACCCCCGCTTTGATGCTGAGGCAGATCAAGCCTCAGGATTCCACATCAGATCAGTACTGTGCGTCCCCATCTGGAATCGGACTCATCAGATAATAGGGGTTGCCCAGATTCTAAATCGCCTGGACAGGAGGACGTTCAATGATGCAGATCAAAGACTGTTTGAGGCCTTTGTGATATTCTGTGGGCTGGGGATCAACAACACCATGATGTACAATCAAGTGAAGAAGACCTGGGCCAAGCAGTCTGTGGCCCTGGATATGCTGTCCTACCACGCCACATGCTCCAAGGTAGAGGTGGACAGACTCAAGGCTGCTAAGATCCCTTTGAGCAGTGAACTGGGCATCGAAGAGTTCCACTTCAACGATTTCTCATTGGACAACGACGCCATGATCACTGCCTCCCTCCGGATGTTTCTGGAACTCGGAGCCGTCCAGAAGTTTAAGATTGACTACGACGTCCTGTGTCGCTGGCTGTTGACGGTGAGGAAGAACTATCGCACGGTGGCATACCATAACTGGAGGCATGCCTTCAACGTGTGCCAGTGCATGTTCCTCATGATCACAACGGCTGGTTTCCAGGATGTTCTGTCGGATGCAGAGACCCTGGCGTTGATGGTGGGTTGTCTCTGCCATGATTTAGACCACCGTGGCACCAACAACGCCTTCCAGGCCAAGACTGGCTCTGCTCTGGCCCTGCTCTACGGGACATCAGCTACTCTGGAGCACCATCACTTCAACCATGCAGTCATGATCCTACAGAGTGAGGGTCATAATATCTTTGCCAACCTGTGTTCCAAAGAGTACAGTAGTATGATGCAGCTACTGAAACAGGCCATCCTCTCCACTGACCTCACCCTGCACTTCCAGAGGAGGAGCCAGTTCTTTGACCGTGTTCTCTCTGGAGAGTTCAGCTGGACAGACGAGGCTCACAGAGAACTTCTCAGGTCTATGCTAATGACAGCATGTGACTTGGGTGCAGTGACCCGCCCCTGGGAGATCTCCAAACAGGTTGCGGAGTTGGTGACCAGTGAGTTTTTCGAGCAAGGTGACAGGGAGAGGTCTGAGCTCAAGTTAACTCCAGCGgcCATCTTTGACCGTAATCGTAAAGACGAGCTGCCCGCCCTGCAGCTGGAGTGGATAGATGGGATCTGTAAGCCCCTCTACCAGGCTCTGATGAAGCTAAACGGGAAGCTGAAGCCTATGGTTGATGGGATAGCAGCCAACCGCATGAAGTGGAAGGAGCTGGGCTCGTCCTatcagcagcacacacacagaactgCAGAGACCAATCAGAGTCCTGGCTCTGAGTCAGGACCCAACCCAGAGACCAATCAAAATCCTGACTCCAGTCAGAACTCGCAACTAGAGTTTGGGTCAAATTCAGTATTTGATCAGACATCAGTTCTTACTACAGAGTCTAGTGGTCATCCAGAGTTTGGGTCAAATTCAGTACTTGATCAGACTTCAGTTCTCACTACAGAGTCTAGTGGTCATCTGGGGTCAGATGGAAGTATAGGGTCTGGTCAGCTGTCTCAGGGGCAGGGGGCTGAGGtttgaagagagagggaaagggagagtgaatga
>TU125259
CAGGTCTATGCTAATGACAGCATGTGACTTGGGTGCAGTGACCCGCCCCTGGGAGATCTCCAAACAGGTTGCGGAGTTGGTGACCAGTGAGTTTTTCGAGCAAGGTGACAGGGAGAGGTCTGAGCTCAAGTTAACTCCAGCGgcCATCTTTGACCGTAATCGTAAAGACGAGCTGCCCGCCCTGCAGCTGGAGTGGATAGATGGGATCTGTAAGCCCCTCTACCAGGCTCTGATGAAGCTAAACGGGAAGCTGAAGCCTATGGTTGATGGGATAGCAGCCAACCGCATGAAGTGGAAGGAGCTGGGCTCGTCCTatcagcagcacacacacagaactgCAGAGACCAATCAGAGTCCTGGCTCTGAGTCAGGACCCAACCCAGAGACCAATCAAAATCCTGACTCCAGTCAGAACTCGCAACTAGAGTTTGGGTCAAATTCAGTATTTGATCAGACATCAGTTCTTACTACAGAGTCTAGTGGTCATCCAGAGTTTGGGTCAAATTCAGTACTTGATCAGACTTCAGTTCTCACTACAGAGTCTAGTGGTCATCTGGGGTCAGATGGAAGTATAGGGTC

Function

NR:

description
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936692.1 False 2941 mRNA 0.53 20 7282430 7304709
TU125259 True 579 TUCP 0.51 4 7303028 7304645

Neighbor

gene id symbol gene type direction distance location
LOC110535004 LOC106596209 coding upstream 203353 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 203455 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 287715 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 338387 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 343680 6912089 ~ 6938750 (+)
cbx3b LOC106573104 coding downstream 54196 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 64634 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 191474 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 311201 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 428248 7732957 ~ 7805441 (+)
G109909 NA non-coding upstream 15979 7266035 ~ 7266451 (+)
G109908 NA non-coding upstream 16496 7265728 ~ 7265934 (+)
G109907 NA non-coding upstream 16708 7265394 ~ 7265722 (+)
G109905 LOC106574028 non-coding upstream 18448 7262188 ~ 7263982 (+)
G109901 NA non-coding upstream 27728 7253774 ~ 7254702 (+)
G110139 NA non-coding downstream 6920 7311629 ~ 7311995 (+)
G110153 NA non-coding downstream 17270 7321979 ~ 7322362 (+)
G110175 NA non-coding downstream 31635 7336344 ~ 7336552 (+)
G110177 NA non-coding downstream 33037 7337746 ~ 7338109 (+)
G110180 NA non-coding downstream 36736 7341445 ~ 7341780 (+)
G109821 NA other upstream 141451 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 371225 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 413454 6855864 ~ 6868976 (+)
G109020 NA other upstream 648517 6633078 ~ 6633913 (+)
G110644 NA other downstream 593887 7898596 ~ 7935137 (+)
G110674 NA other downstream 768657 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1732095 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1916776 9221418 ~ 9229025 (+)
G109917 NA non-coding upstream 9645 7293040 ~ 7293383 (+)

Expression


Co-expression Network