LOC110514761 (LOC106597212)


Basic Information

Item Value
gene id LOC110514761
gene name LOC106597212
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7830223 ~ 7857449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936921.1
ATGCCTCCTGTAAATTTAGCGCTCACTGAGGCAGGATATTTAATGGGCAATGGTTGGCAGGCACCCCCCTCCTAAAGACGCAGGgatactgagagaggagagagcgggcTGTTGAGGGCAGTAGgcaagagagagtcagagagtgaGAGTGGAGTCGTTTTGCTGTGGCTCCTCAGTAAACCCAAGTTGGAGAGAGAGGGCATTGTATTGACAGCAGCATGATCCTTATCACATTTGGACTCTATCTTCCACTATTGTTTTGTTATGTCTTGTCTCAGTCCTCTTTCCTGGACAATATTCTCTCATTCCCAGCAGCTCTCCAACAACAACCTGCCGTGGACCAGCAGAGGAAATTCAACCCCTGCTGTTTACAGAGTCCACCCCCGCCCCCCctattccctcctcctccctcactgtGGCACCCCGGTGGTCATAATGAGGAGACCAGTAAGGGAGGTGATCACAGACCAGATCCAGATACAGGGACGGAGCTGAAAGGGCCCAGCTGTGTCCCAGGACCCCCTGGCCCCAACGGACCCCCCGGTCCTCAGGGTCCAGCTGGGCTACCAGGTCTGACGGGACCAAAAGGTGAAAAGGGAGAACTGGGACGACCTGGACAAAAGGGTCGGACGGGGCCTCCAGGTCTCCCGGGGCGCCAGGGACCAGCCGGGTGGCCAGGACCAAATGGGCCCAAGggggagaagggagatggTGGATTGATGGGAATACCTGGAGCAAGAGGACCTCTTGGACCTAAGGGTTTACCTGGATACAAAGGAGAAAAGGGTTCCCGTGGTGACCGTagtgagagagggatgaagggagacaAGGGCACAATGGGCTTCCCTGGAATGCTTGGACAGAAAGGGGAAATGGGTCCAAAGGGAGAACCTGGAATCTCAGGGAATAGAGGACCGACGGGCAGACCAGGGAAGAGGGGCAAACAGGGAGGGAAGGGCGACAATGGGATTATCGGCCCTCTAGGTCCAGCAGGTCCTCAGGGGCCCCCAGGCCACCCTGGTCCCCCAGGTCTCCCAGCCTCAGGACTCTACGTGGTTGGAACGAAAGGTGAGAGGGGGCTACCAGGTCTTCCTGGACCTTGCAGCTGTAACTCCATTAGTGTGAAGAGTCCACAGTTTGATGAACATAGTTCCAGGAGCGACTACGCCAAAGTGCCGGCGATATTTGTGGTAAACAATCAAGAAGAACTAGATCGTCTTCATACGGACAATGCCCTAGCCTTCCGGAAAGACCAGAGATCGCTTTACTTCAAAGACACCAGCGGATGGCTGCCCATTCAGCTGACGCCGTTCCAGTCTACGGAGAACGCTCCGGAACAGGAGGGTTACTGTGGCGACGGGATCGTTCAGATTCCCAATGGGGAGGAATGTGACGACGGGAATAGGATTGTCACCGACGGCTGCGTCAAGTGTAAACATGCTTACTGTGGAGATGGTTATCGCTACGACGGGGCCGAGGAATGTGATGGAAAGGACTTTGGCTATCAGACATGCAACTCATATCTCCCAGGGTCTTATGGTCGTCTCAGATGCACTCCGTACTGTGTCATTGACTCTACAAACTGCAAGTATTTCACATGAGGAGGACCCTGGACACAGCAGTGGGATCCTTCTTGTCTCGTTTGCTTTGGTACTGAATAGGATGACGGTAATGCAAATAAAAGatcaacaacaacactgcaaaCAAGAGACTCAAAAAGGAAGTGTTGACAAACTGGACTAAGCCTGACAAAataactaaaactacacacactAACTCTGTTGTATCGCTGCTGAAGCCATGTAGCTCCCGAGGAGGGGAGCCGGGGCCGGTAAAACGTCCCCTCATCCATTCGCACTGGACAATTTCACTTTGTCTTAAATAAAACTCAACTCAAGACTGAAGAGGCTCTGCCCAACTGATAGGACCAGCCGCTGAACGAGAGGCGGTCAAATGAGAGACAGCCAGGAAGGGAAAGACAGCCAATGGGAAAGCTCTGAGAAAGTGAGAGACTCGTGGGTGGAGCCGGAAGCCATATTTACCTCGACGTAGAACTGTTAAAGAAGAGAGAACCAGGTCTGAACAATCAGAAGTAGGGTGCTGTGTATTTTACTGCAATGTCAATGACGTCATGTACTGTAGCATTTGCATGAGGCTGAGATTGCTGTGAGACCATGGCCACAGATGTCATTACCTAGGCATTTAACCAATCACAATACTTACTATCGTTGTCATGAGCTtcgtactgtgtatatatagtagGTATACGTCTCCAATTGTACGTAGGGAGTATATTGTATGTTATAATTGTACTAATCAGGACAGCAGGGGCATGTTAGTACATGTTATACAGTATTCAGGAGGATTCTGAGAGCCTTGGTCAGTCTGTACTGAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTGAAGCCTTGGTCAGATCCTCTTCAGAAGAACAGTAaagctatgtactgtacagtagtagcATTAAGCCAAGATGACTGCCTGTGGAAATAGCAGCCAAGCTGATAGACTGGGAACCCTCACCTTCTGGTAGAACTGAACAGCtgttgtcccaaatgacaccctattccctatgtagtgcactacttgtgacaagagtcctatgggccctggttaaaagtagtgcactatataggggatagtgtgccatttggacaGCCAGGCCCGTGCGCTCTTAGCTTTTGATGGCACTGTACTGTAGTTGAAGAGGGCCGTTCAGAATGTGGACATTGTGGGCAAGGTCAAGCTTTGCTTTAGTTTAGATTGACATTTCCACGGTTTAACTCAGGAACCTCTAACATAATGTTTTCAGAGAAATCCTCCCTCATATCCACTGTAGAACACAGATGAGACCAATGAGTCTATGCTGCACACTGACTGTTACACTGCCCCCCTCCTCACTCAGATGTGCTTACTGTACATGTTGATGACTCGTGCCCTCAGTCCTCCAGGTAAAGAGGAGGACCTCAGTGAACTACTGTCTGCAGGGAGATATGACACGTGAAGGCAGGCAAACTGTtattattactgctactactacatgtTCTTAAATCATTTCCTCATTGCAGAACAGGAAGCTTGTTTAGCTGCTAATTGGTAGGAAGTGAATTCCGATAGTTAGGGTGGGAAACCTTATGACAGTCTAGAAAGCTCTGGACATCTTCCTGTCTCGTATTTATAGCAGCACTCCTCTTGATACCTCCAGCCTGCCTGTTATATAACTGGAGCAGAACTACTGCACCACTCAGTGGAGAACTGAACACTATAGTTGTAGTCTGCAGTACTTCCTGTATTCCCTCAGTAGTTTAAGAGAACGTTTCAGGATAAGCTGTTCTTTACCACAAGCTATAGGTCGCCGTGCCAACGGAGGCCGACCTTTAACCTCACCCACACTTAGGAAAATATTGTTGCTCACGTAAAAGTGGATGTATGAAAATATGTCATTTCAAGACTGTTCTAAATGTTACATCTGCATGTTAGTGGTACTGTAATTTACAAGTTTAAAATGCAACCGATTTGCCAAAGGAGACTGTGAATGAAGCCTACATGCTGTAAGTAAATATTAGTCAACTCTCGACAAGGTATATGCTTTTAAAGAAATATTGATGGTTCTTGTTAATGTAACTGTATAACTGTAAGGACTGAATATTACGTCAACTTTTATATGACAGGTATAAATGTATTATCCATTGCACCGTGTATAAACACATGAAATATCCATTTGTTTGGCTAATATGAGTGTACTGTATGCTGTAGGTACACTGGTAGCATGTGATAACATTACACAATGCTTTTTGGTGGTGAATGCACTCGCATATCAGGATTTCAAAACTCCTCTCTGATTTCATAATTAAAACATGTTTGACACAGACATGCATTATTGAGAACAAAATAAAGATGAGAAAATGGAA
>XM_036936918.1
CTCCTGTAAATTTAGCGCTCACTGAGGCAGGATATTTAATGGGCAATGGTTGGCAGGCACCCCCCTCCTAAAGACGCAGGgatactgagagaggagagagcgggcTGTTGAGGGCAGTAGgcaagagagagtcagagagtgaGAGTGGAGTCGTTTTGCTGTGGCTCCTCAGTAAACCCAAGTTGGAGAGAGAGGGCATTGTATTGACAGCAGCATGATCCTTATCACATTTGGACTCTATCTTCCACTATTGTTTTGTTATGTCTTGTCTCAGTCCTCTTTCCTGGACAATATTCTCTCATTCCCAGCAGCTCTCCAACAACAACCTGCCGTGGACCAGCAGAGGAAATTCAACCCCTGCTGTTTACAGAGTCCACCCCCGCCCCCCctattccctcctcctccctcactgtGGCACCCCGGTGGTCATAATGAGGAGACCAGTAAGGGAGGTGATCACAGACCAGATCCAGATACAGGGACGGAGCTGAAAGGGCCCAGCTGTGTCCCAGGACCCCCTGGCCCCAACGGACCCCCCGGTCCTCAGGGTCCAGCTGGGCTACCAGGTCTGACGGGACCAAAAGGTGAAAAGGGAGAACTGGGACGACCTGGACAAAAGGGTCGGACGGGGCCTCCAGGTCTCCCGGGGCGCCAGGGACCAGCCGGGTGGCCAGGACCAAATGGGCCCAAGggggagaagggagatggTGGATTGATGGGAATACCTGGAGCAAGAGGACCTCTTGGACCTAAGGGTTTACCTGGATACAAAGGAGAAAAGGGTTCCCGTGGTGACCGTagtgagagagggatgaagggagacaAGGGCACAATGGGCTTCCCTGGAATGCTTGGACAGAAAGGGGAAATGGGTCCAAAGGGAGAACCTGGAATCTCAGGGAATAGAGGACCGACGGGCAGACCAGGGAAGAGGGGCAAACAGGGAGGGAAGGGCGACAATGGGATTATCGGCCCTCTAGGTCCAGCAGGTCCTCAGGGGCCCCCAGGCCACCCTGGTCCCCCAGGTCTCCCAGCCTCAGGACTCTACGTGGTTGGAACGAAAGGTGAGAGGGGGCTACCAGGTCTTCCTGGACCTTGCAGCTGTAACTCCATTAGTGTGAAGAGTCCACAGTTTGATGAACATAGTTCCAGGAGCGACTACGCCAAAGTGCCGGCGATATTTGTGGTAAACAATCAAGAAGAACTAGATCGTCTTCATACGGACAATGCCCTAGCCTTCCGGAAAGACCAGAGATCGCTTTACTTCAAAGACACCAGCGGATGGCTGCCCATTCAGACTTCTTTCTTCCAGCTGACGCCGTTCCAGTCTACGGAGAACGCTCCGGAACAGGAGGGTTACTGTGGCGACGGGATCGTTCAGATTCCCAATGGGGAGGAATGTGACGACGGGAATAGGATTGTCACCGACGGCTGCGTCAAGTGTAAACATGCTTACTGTGGAGATGGTTATCGCTACGACGGGGCCGAGGAATGTGATGGAAAGGACTTTGGCTATCAGACATGCAACTCATATCTCCCAGGGTCTTATGGTCGTCTCAGATGCACTCCGTACTGTGTCATTGACTCTACAAACTGCAAGTATTTCACATGAGGAGGACCCTGGACACAGCAGTGGGATCCTTCTTGTCTCGTTTGCTTTGGTACTGAATAGGATGACGGTAATGCAAATAAAAGatcaacaacaacactgcaaaCAAGAGACTCAAAAAGGAAGTGTTGACAAACTGGACTAAGCCTGACAAAataactaaaactacacacactAACTCTGTTGTATCGCTGCTGAAGCCATGTAGCTCCCGAGGAGGGGAGCCGGGGCCGGTAAAACGTCCCCTCATCCATTCGCACTGGACAATTTCACTTTGTCTTAAATAAAACTCAACTCAAGACTGAAGAGGCTCTGCCCAACTGATAGGACCAGCCGCTGAACGAGAGGCGGTCAAATGAGAGACAGCCAGGAAGGGAAAGACAGCCAATGGGAAAGCTCTGAGAAAGTGAGAGACTCGTGGGTGGAGCCGGAAGCCATATTTACCTCGACGTAGAACTGTTAAAGAAGAGAGAACCAGGTCTGAACAATCAGAAGTAGGGTGCTGTGTATTTTACTGCAATGTCAATGACGTCATGTACTGTAGCATTTGCATGAGGCTGAGATTGCTGTGAGACCATGGCCACAGATGTCATTACCTAGGCATTTAACCAATCACAATACTTACTATCGTTGTCATGAGCTtcgtactgtgtatatatagtagGTATACGTCTCCAATTGTACGTAGGGAGTATATTGTATGTTATAATTGTACTAATCAGGACAGCAGGGGCATGTTAGTACATGTTATACAGTATTCAGGAGGATTCTGAGAGCCTTGGTCAGTCTGTACTGAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGTAGAGGCAGATCTTAAACCTTGGTCAGTCTGTACTGAAGAGGCAGATCTTAAGCCTTGGTCAGTCTGTACTGAAGAGGCAGATCTGAAGCCTTGGTCAGATCCTCTTCAGAAGAACAGTAaagctatgtactgtacagtagtagcATTAAGCCAAGATGACTGCCTGTGGAAATAGCAGCCAAGCTGATAGACTGGGAACCCTCACCTTCTGGTAGAACTGAACAGCtgttgtcccaaatgacaccctattccctatgtagtgcactacttgtgacaagagtcctatgggccctggttaaaagtagtgcactatataggggatagtgtgccatttggacaGCCAGGCCCGTGCGCTCTTAGCTTTTGATGGCACTGTACTGTAGTTGAAGAGGGCCGTTCAGAATGTGGACATTGTGGGCAAGGTCAAGCTTTGCTTTAGTTTAGATTGACATTTCCACGGTTTAACTCAGGAACCTCTAACATAATGTTTTCAGAGAAATCCTCCCTCATATCCACTGTAGAACACAGATGAGACCAATGAGTCTATGCTGCACACTGACTGTTACACTGCCCCCCTCCTCACTCAGATGTGCTTACTGTACATGTTGATGACTCGTGCCCTCAGTCCTCCAGGTAAAGAGGAGGACCTCAGTGAACTACTGTCTGCAGGGAGATATGACACGTGAAGGCAGGCAAACTGTtattattactgctactactacatgtTCTTAAATCATTTCCTCATTGCAGAACAGGAAGCTTGTTTAGCTGCTAATTGGTAGGAAGTGAATTCCGATAGTTAGGGTGGGAAACCTTATGACAGTCTAGAAAGCTCTGGACATCTTCCTGTCTCGTATTTATAGCAGCACTCCTCTTGATACCTCCAGCCTGCCTGTTATATAACTGGAGCAGAACTACTGCACCACTCAGTGGAGAACTGAACACTATAGTTGTAGTCTGCAGTACTTCCTGTATTCCCTCAGTAGTTTAAGAGAACGTTTCAGGATAAGCTGTTCTTTACCACAAGCTATAGGTCGCCGTGCCAACGGAGGCCGACCTTTAACCTCACCCACACTTAGGAAAATATTGTTGCTCACGTAAAAGTGGATGTATGAAAATATGTCATTTCAAGACTGTTCTAAATGTTACATCTGCATGTTAGTGGTACTGTAATTTACAAGTTTAAAATGCAACCGATTTGCCAAAGGAGACTGTGAATGAAGCCTACATGCTGTAAGTAAATATTAGTCAACTCTCGACAAGGTATATGCTTTTAAAGAAATATTGATGGTTCTTGTTAATGTAACTGTATAACTGTAAGGACTGAATATTACGTCAACTTTTATATGACAGGTATAAATGTATTATCCATTGCACCGTGTATAAACACATGAAATATCCATTTGTTTGGCTAATATGAGTGTACTGTATGCTGTAGGTACACTGGTAGCATGTGATAACATTACACAATGCTTTTTGGTGGTGAATGCACTCGCATATCAGGATTTCAAAACTCCTCTCTGATTTCATAATTAAAACATGTTTGACACAGACATGCATTATTGAGAACAAAATAAAGATGAGAAAATGGAA

Function

NR:

description
acetylcholinesterase collagenic tail peptide isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936921.1 False 4549 mRNA 0.47 16 7830223 7857449
XM_036936918.1 True 4560 mRNA 0.47 16 7830227 7857449

Neighbor

gene id symbol gene type direction distance location
plekha8 plekha8 coding upstream 919 7815250 ~ 7829304 (+)
chn2 chn2 coding upstream 24782 7732957 ~ 7805441 (+)
creb5b LOC106573409 coding upstream 123563 7615910 ~ 7706660 (+)
tax1bp1b LOC106594183 coding upstream 298949 7496183 ~ 7531274 (+)
snx10b LOC106593746 coding upstream 453128 7369343 ~ 7377095 (+)
LOC100136727 LOC100136727 coding downstream 111649 7969098 ~ 7971187 (+)
LOC118937630 LOC100136727 coding downstream 128379 7985828 ~ 7988121 (+)
LOC118937631 LOC100136727 coding downstream 149382 8006831 ~ 8014142 (+)
LOC118937632 LOC100136727 coding downstream 160829 8018278 ~ 8020571 (+)
LOC118937633 LOC100136727 coding downstream 168521 8025970 ~ 8028263 (+)
G110329 NA non-coding upstream 20234 7809544 ~ 7809989 (+)
G110322 NA non-coding upstream 116037 7713124 ~ 7714186 (+)
G110330 NA non-coding upstream 117940 7711599 ~ 7712283 (+)
G110324 NA non-coding upstream 120521 7709167 ~ 7709702 (+)
G110332 NA non-coding upstream 122363 7706940 ~ 7707860 (+)
G110642 NA non-coding downstream 14309 7871758 ~ 7872286 (+)
G110646 NA non-coding downstream 22411 7879860 ~ 7904188 (+)
G110660 NA non-coding downstream 55082 7912531 ~ 7981149 (+)
G110673 NA non-coding downstream 198126 8055575 ~ 8138469 (+)
G110702 NA non-coding downstream 272312 8129761 ~ 8132133 (+)
pde11al LOC106573285 other upstream 525578 7282430 ~ 7304709 (+)
G109821 NA other upstream 689244 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 887140 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 919018 6908511 ~ 6911256 (+)
G110644 NA other downstream 41147 7898596 ~ 7935137 (+)
G110674 NA other downstream 215917 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1179355 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1364036 9221418 ~ 9229025 (+)
G111453 NA other downstream 1472820 9330269 ~ 9331616 (+)

Expression


Co-expression Network