LOC118937633 (LOC100136727)


Basic Information

Item Value
gene id LOC118937633
gene name LOC100136727
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8025970 ~ 8028263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937020.1
atgatcatgggaggtgtgagagaattgctgctcgttgtgatgactgtgggggttgtcaaagtttcttgttaccctgttggaaagtcccagaagcaagatcaagtctctctgcagaggagacttggagagctgtcatcaaatgacgtctccattgtgcatgccctggccttgctccgatccatagggtctgacgctaaacaagccagagaagagtatttagagaccaatgaagtagaatcccaagcttctccaaaccatggtagctctccggcaaatgatgccctgtcctctgaggagaagctgaggcgcgtgtcctcggacgacgccgccacctctgaagctgcgaccggcccgtctggcgacgccgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgacgccacctctgaagctgcgaccggcccgtctggcgacgac

Function

NR:

description
apopolysialoglycoprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937020.1 True 1848 mRNA 0.68 4 8025970 8028263

Neighbor

gene id symbol gene type direction distance location
LOC118937632 LOC100136727 coding upstream 5399 8018278 ~ 8020571 (+)
LOC118937631 LOC100136727 coding upstream 11828 8006831 ~ 8014142 (+)
LOC118937630 LOC100136727 coding upstream 37849 7985828 ~ 7988121 (+)
LOC100136727 LOC100136727 coding upstream 54783 7969098 ~ 7971187 (+)
LOC110514761 LOC106597212 coding upstream 168521 7830223 ~ 7857449 (+)
LOC110516794 LOC100136727 coding downstream 4927 8033190 ~ 8040571 (+)
LOC118936929 LOC100136727 coding downstream 22147 8050410 ~ 8053030 (+)
LOC118936503 LOC106605709 coding downstream 104176 8132439 ~ 8159036 (+)
LOC110514591 LOC106595161 coding downstream 176837 8205100 ~ 8327730 (+)
LOC118944039 NA coding downstream 207640 8235903 ~ 8262731 (+)
G110660 NA non-coding upstream 44821 7912531 ~ 7981149 (+)
G110646 NA non-coding upstream 121782 7879860 ~ 7904188 (+)
G110642 NA non-coding upstream 153684 7871758 ~ 7872286 (+)
G110409 NA non-coding upstream 174383 7849144 ~ 7851587 (+)
G110405 NA non-coding upstream 186437 7838484 ~ 7839533 (+)
G110673 NA non-coding downstream 27312 8055575 ~ 8138469 (+)
G110702 NA non-coding downstream 101498 8129761 ~ 8132133 (+)
G110751 NA non-coding downstream 245728 8273991 ~ 8274437 (+)
G110717 NA non-coding downstream 256047 8284310 ~ 8329229 (+)
G110900 NA non-coding downstream 311648 8339911 ~ 8340121 (+)
G110644 NA other upstream 90833 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 319481 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 721325 7282430 ~ 7304709 (+)
G109821 NA other upstream 884991 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 1082887 6941465 ~ 6944043 (+)
G110674 NA other downstream 45103 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1008541 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1193222 9221418 ~ 9229025 (+)
G111453 NA other downstream 1302006 9330269 ~ 9331616 (+)
G111788 NA other downstream 1412046 9440309 ~ 9444041 (+)

Expression


Co-expression Network