LOC118944039


Basic Information

Item Value
gene id LOC118944039
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8235903 ~ 8262731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961564.1
ATGGTTGTTACTGGATCTGAGATGAAAGGAGAGGTCAGCGACGTTGCAGCCGCTCCCAAACACagcatgggAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCGGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAATGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAATGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCACCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCATCTTGGATAGAAACGCTTGGCCTGCCTTATCCACCCCTGACAGTCTTCAGCTGAAATGTCTCTGCAGACGGCATCCATTGCATCCAGAAGGgacatttggtcatgtgaccgatgatcatacactttccacctccaggcagaaaAAAGGTTGGGGAacgCTGTTCTCTTTCTGCTTCTGGCACCAGTTGTTGGTGGAGGTCATCTAAAAACAAAAGAAGGTGCTCAGTGTTGCAGGGTCCAATCTGGCATTTCTGCAGGACCAAACCAGCACTCGAGGTTGAAGCACACATTGGGATATTTGCTCCTCTCTGACTCGGCACGTCAACAGTGGCCCTTTTTCCTATGACGTTTCTTACTCGCCGATGTGCTTTTGCCAGGTTAAACCCTGCCTCGTCTACATACATTATTTCCTTATGGGGTCTGATTAGCCTCCACCTCCATGACTCTCTGAAAGAAATCAAACACAGCATGTGTAAATGCTTTTCAGTATGtcctactgtatgtactgtaaccTATGTTTACATGTAGAGTAGCATAGTGTAAAAGTCACTATAGAACTAGACATATTGGATAGACATCATACCTGGACGTATTGGTGCCGGAGTTCCTTGACCCGCTCACTGTTCCTTTCAAAAGTGTGTAAAACTGTTTCATTCCTACTCTGTGTTTGGTCAGAGTCTGAGCAATGGTAGTCAGGCTGATGCTTTCCACATTTTTAAATACCAGGTtgtaccaaaaaagtgttaaacaaattaaaatatattttatatttgagattcttcaaatagccaccctttgccttgatgacagggcaaagtattgacacgtttttttgaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591911

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961564.1 True 2218 mRNA 0.48 3 8235903 8262731

Neighbor

gene id symbol gene type direction distance location
LOC118936503 LOC106605709 coding upstream 76867 8132439 ~ 8159036 (+)
LOC118936929 LOC100136727 coding upstream 182873 8050410 ~ 8053030 (+)
LOC110516794 LOC100136727 coding upstream 195332 8033190 ~ 8040571 (+)
LOC118937633 LOC100136727 coding upstream 207640 8025970 ~ 8028263 (+)
LOC118937632 LOC100136727 coding upstream 215332 8018278 ~ 8020571 (+)
LOC118936502 LOC106574003 coding downstream 217785 8480516 ~ 8505603 (+)
LOC118937640 NA coding downstream 365040 8627771 ~ 8645961 (+)
LOC110518388 LOC106598833 coding downstream 557628 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 827829 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 840781 9103512 ~ 9105845 (+)
G110673 NA non-coding upstream 97434 8055575 ~ 8138469 (+)
G110702 NA non-coding upstream 103770 8129761 ~ 8132133 (+)
G110660 NA non-coding upstream 254754 7912531 ~ 7981149 (+)
G110646 NA non-coding upstream 331715 7879860 ~ 7904188 (+)
G110642 NA non-coding upstream 363617 7871758 ~ 7872286 (+)
G110751 NA non-coding downstream 11260 8273991 ~ 8274437 (+)
G110717 NA non-coding downstream 21579 8284310 ~ 8329229 (+)
G110900 NA non-coding downstream 77180 8339911 ~ 8340121 (+)
G110904 NA non-coding downstream 81457 8344188 ~ 8344471 (+)
G110936 NA non-coding downstream 114514 8377245 ~ 8379321 (+)
G110674 NA other upstream 131983 8073366 ~ 8103920 (+)
G110644 NA other upstream 300766 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 529414 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 931258 7282430 ~ 7304709 (+)
G109821 NA other upstream 1094924 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 958754 9221418 ~ 9229025 (+)
G111453 NA other downstream 1067538 9330269 ~ 9331616 (+)
G111788 NA other downstream 1177578 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 1439309 9701990 ~ 9742723 (+)

Expression


Co-expression Network