LOC118937640


Basic Information

Item Value
gene id LOC118937640
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8627771 ~ 8645961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034903.1
TTCTCTTTGAAGATACAAGGAAGTTTGAGCATCTGTATAATTGTCGGCAAGGAAACGAGACGCTGCACAGCCCCCTAACATTGTACGGCAAAGGAAAATCTTGCGCATGAGAGCATGCATACCTCTCACGTCAATCATGATGAGTTCGTCAAATAGTCACAAACTGTTACATACTTTCCCGCGGATTGAAGTAACGCTATATAGTGACACAAGTTTGAAGTTTTAGTGACAAGGAATTGTCAGGATGAAACATGTCTGTCGAGGAGAATGTTCCCCCCTTTTAGGAGGATGACAGAGTAAAGTTTATAAAAACAAACGTTTTGTCGGATTTTGGAAGTGAGGCAGGAAACCTGGGAGAAGAAGTGTGTTACAGTCGAGGAAAGCCAGACCGCTCTGAAAGGTGTCTTCGAAAAGCAAAGTATTGTTTTTTACTCTACCATCGACTGGTGCTCCCCGAGGCAAGGCTGgtGACCAACGGGCAGGCTTTCTACTGGCTGTCTCAGCTGAGGCATCGCTGGGACGAGCAGCAGAGACACTGCCTGGCTAACATCTGTGATGTTCAGTTCTTCTACTCCTACCAATACCTGGTAGGAACACCTCTCGGCTGGTCATCACCCCCTCATTGACCGTTGTTTTCTACGGCTGCTGTACTGTAGGCTGCTCTGGTGCACACGGCTGAGACGGCGCATCTGAGGTACTTTATGGATCTGTTGCTGGAGAGGGGCCAACCCCTGATGCTGGTGGGGAATGCAGGCGTGGAGAATACTTCTCTGGTCAGGAATCAGGTAGACCACCTGACAAATATCGACATGACCACTGAAGTACCCCTCAACTACTACTGCACCTCCCTCATGCTGCAGAGTACGACAGGCAGAAGATAACCCTAAATCCACCACTGTCAGTATGTTGCCTGTATGAAACCTACTTCTGGGAGCTTCACCATCAACCCTGGACTCCAGG

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 11, axonemal

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034903.1 True 960 mRNA 0.49 4 8627771 8645961

Neighbor

gene id symbol gene type direction distance location
LOC118936502 LOC106574003 coding upstream 122168 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 300041 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 365040 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 468735 8132439 ~ 8159036 (+)
LOC118936929 LOC100136727 coding upstream 574741 8050410 ~ 8053030 (+)
LOC110518388 LOC106598833 coding downstream 174398 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 444599 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 457551 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 460343 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 503212 9149173 ~ 9168951 (+)
G111071 NA non-coding upstream 78875 8548555 ~ 8548896 (+)
G111067 NA non-coding upstream 85895 8541616 ~ 8541876 (+)
G111015 NA non-coding upstream 105008 8522040 ~ 8522763 (+)
G110994 NA non-coding upstream 160742 8466830 ~ 8467029 (+)
G110991 NA non-coding upstream 161099 8464002 ~ 8466672 (+)
G111165 NA non-coding downstream 2778 8648739 ~ 8648943 (+)
G111178 NA non-coding downstream 20633 8666594 ~ 8667216 (+)
G111195 LOC106605879 non-coding downstream 67520 8713481 ~ 8714511 (+)
G111204 NA non-coding downstream 83338 8729299 ~ 8732801 (+)
G111212 NA non-coding downstream 95520 8741481 ~ 8745070 (+)
G110674 NA other upstream 523851 8073366 ~ 8103920 (+)
G110644 NA other upstream 692634 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 921282 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1323126 7282430 ~ 7304709 (+)
G109821 NA other upstream 1486792 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 575524 9221418 ~ 9229025 (+)
G111453 NA other downstream 684308 9330269 ~ 9331616 (+)
G111788 NA other downstream 794348 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 1056079 9701990 ~ 9742723 (+)

Expression


Co-expression Network