LOC110506654


Basic Information

Item Value
gene id LOC110506654
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9103512 ~ 9105845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937243.1
ctgtacctgttcaaagCATTATCTCATCGTCTGCACCAACTACCACAGAACATGCTTCAACTGAAATGTTAACTACTGGTTACTCAACTAGAGAGGAAGCAACTACTGGTTACTTACCTACAAGTGCTTCTGCTTCAAACGTCCAAAACAGTCCCTCAACACCAGTACCAACCCCATTCAATACCACAGAACATGCTTCAACTGAACAGTTAACTACTGaacacctaacctctgacccactgactactgtacctgttcaaaaCACCCCCTCAACACCAGTACAaactacattcaacaccacagaacatacttcaactgaacacctaacctctgacccactgactactGTACCTGTTAAAAAACCAACTGCATTCAATATCACAGTAAATGTTACTAAACAGTTGACTACTGAACTCCTAACCTCTGACCAAGCGACTATTGTACCTGTTCAAAACAATATCTCTATATCTGTACCAGCTTCATTGATTTCCACAGAACATGTTTCATCTGAACAGTTAGCTAATGaacacctaacctctgacccagcaactactgtacctgttcaaagCAATATCTCTATATCTGTACCAGCTTCATTGATTTCCACAGAACATGTTTCATCTGAACAGTTAACTAATGaacacctaacctctgacccagcaactactgtacctgttcaaagCAATATCTCAATGCCTGTACCAACTACATTAACTAGAGAGCAAGCAACTACTGGTTACATACCTACAAGCGCTACTTTCAATACCACAGTGCATGGTTCTACTGAACACACAACCTCTGATCAAGCAATTACTGAACCTGTTCAAAACACTCCTACATCTGTACCAGTAATATTCACTACCACAGACCAAGTGACTACTAGTTACATACCTACAAGTACCTCGACTGCACCTGTCCAAAATACTCCCTCATCGTCTGTACAaactacattcaacaccacagaacatacttcaccagaacagttaactactgaactcctaacctctgacccactgactactgtacctgttcaaaaACCAGCTACATTCAATACCACAGAACATACTTCACAAGAACAGTTAACTACTGAactcctaacctctgacccactgactactgtacctgttcaaaaCACCCCCTCAACACCAGTACAAACTATATTCAACACCACAGAACATACTTCAACTGAAATGTTAACTACTGGATACTTACCTATACGTGCTTCTGCTTCAAACGTCCAAAACAGTCCCTCAACACCAGTACCAACCACATTCAACACAACAGAACATGCTTCAACTGAACAGTTAACTACTGaacacctaacctctgacccactgactactgtacctgttcaaaaCACCCCCTCAACACCAGTACAaactacattcaacaccacagaacatacttcaccagaacagttaactactgaactcctaacctctgacccactgactactGTACCTGTTAAAAACACGACCTCAACGTCTGTACCAACTACATCCAATACCACAGTGCGTGTTTCCACTGAAGAGGCAACTCCTGAACGCTCAACCGCTAACCAAGCCACTACTGCTTACTTACCTGCAACAACTGTTGGAAACACTCCCTCAACACCAGTACCAACCATGTTCAATGCCACAGTGCATGTTTCTACTGaacacctaacctctgacccactgactactGTTCCTGTTCAAAACAGTCCCCCAACGTCTATACCAACTACATTCAATAGAACAGACCAAGTTTCAACTGAACAGTTAACTACTGAACACCTAAATACAGAAAGTGCACTTACTGTACCTTTTCAAAGCATTATCTCATCGTCTGCACCAACTACCACAGTACATGCTTCAACTGAAATGTTAACTACTGAACACTCAACTACAGAGAAAGTGACTACTGATTTCTCACCTACAAGAGCTTCTAATGCTAATGTCCAAAACATTTCCTCAACGTTTACCAAGTACATTCAATACCACAGCATGTTTCAACTGAAGAGGCGACTACTAAACACCTTACTACTGAGAATGTAAAACATCAATCAACAACTGAGACTGCAGACACAGAAATGCAACACAGCATTACACAAGTGACTACTGAACATACTTTATAACCACAGTGGCTGAGACTGCCCCATACAGTACTACAGGGCCTGTCAGTCTCTCCACTGTTATGCCAAATGAAAACAGTCAAGGTTTAAGTCCAGGTAACTTTCATCATTATATCACaattattgacatgttgaaagcctAATAGTCTATTTTTTGTTTGGCTGTGGATTTATGTTGCTTCAAAGATGTTATATTACAGAGCAGAGGTATAAATGC

Function

NR:

description
mucin-5AC-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937243.1 True 2330 mRNA 0.41 3 9103512 9105845

Neighbor

gene id symbol gene type direction distance location
LOC110520725 LOC106605921 coding upstream 2153 9090560 ~ 9101359 (+)
LOC110518388 LOC106598833 coding upstream 31063 8820359 ~ 9072449 (+)
LOC118937640 NA coding upstream 457551 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 597909 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 775782 8205100 ~ 8327730 (+)
LOC110520726 LOC106605921 coding downstream 459 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 43328 9149173 ~ 9168951 (+)
LOC110535199 LOC106606086 coding downstream 69825 9175670 ~ 9189203 (+)
LOC118937651 LOC106606075 coding downstream 106229 9212074 ~ 9216058 (+)
LOC110535224 aif1 coding downstream 115573 9221418 ~ 9229025 (+)
G111368 NA non-coding upstream 36846 9066381 ~ 9066666 (+)
G111367 NA non-coding upstream 37600 9065546 ~ 9065912 (+)
G111365 NA non-coding upstream 47690 9055284 ~ 9055822 (+)
G111254 NA non-coding downstream 10688 9116533 ~ 9124215 (+)
G111258 NA non-coding downstream 18406 9124251 ~ 9131154 (+)
G111257 NA non-coding downstream 32565 9138410 ~ 9144906 (+)
G111384 NA non-coding downstream 39865 9145710 ~ 9146042 (+)
G111386 NA non-coding downstream 43011 9148856 ~ 9149078 (+)
G110674 NA other upstream 999592 8073366 ~ 8103920 (+)
G110644 NA other upstream 1168375 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1397023 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1798867 7282430 ~ 7304709 (+)
G111453 NA other downstream 224424 9330269 ~ 9331616 (+)
G111788 NA other downstream 334464 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 596195 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 668358 9773574 ~ 9776807 (+)

Expression


Co-expression Network