LOC110535199 (LOC106606086)


Basic Information

Item Value
gene id LOC110535199
gene name LOC106606086
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9175670 ~ 9189203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937271.1
TAACCTGGGCTGACCAAAGGACTTCAGAAAGACCCTGCCGTGGTGCAACCTAACCTGGGCTGACCAAAGGACTTCAATCATCCTCCAACTGGGAGCCATATTTCCACCCAGTTGCACCATGAGAACAAGACAAAGACCTCCAGTGCTTTGGTGTGTCAGGTCAACATGTTACTGAGATATCCAAGGATATCGGTCGTGGTTGTACAATTTctcagctgttttttttttcccTTGAAATAATAGTTGGTTATCCAGAGGGTCAAGACAAGACAATATTTACCCATCCTTGAGCAGGACCATGCTAACAGTGAAGAGGGGTGGCACATGCAGGGTCTGTCAGGAGTCCTGTATAAAAGGGAAGACCAGAGTGAAAGGTGATTTTTGGGGGGACAGGGAGAGTGAGACTTAAAGCCTGCATAATGACAGCATATGTGTCAGTGGTGATTGTGGGTGCTGTGGTCATGCTTACACTGTTATGGATCCTGCTCATCTACCTCCCTGGAAAAGGAGACAAAGTTACACAGGGAGAACCCAATGGATGTCAGTCAGCGGCTGTTGGGTCTAGACTTCTGCACTCTTTCTATCAGTtctttccctgttctctctctccttctctccctggccctctctctctccctctgctgggCAACATGCTGGAGCTGGCACACGACCACCTGCCCAGTCACCTGACCTCCCTGGCACGTCGCTATGGCAACATCTACCGCCTCAAGTGTGGCAACACAACCATGGTGGTATTAAACAGTGGTGACATCATCAGAGAAGCCTTGGTGAAGAAATGGTCGGACTTTGCTGGGAGACCACATTCTTACACCGGAGACGTGGTGTCAGGGGGAGGCCGCTCCATCTCTCTGGGGGACTACAGTGAGGAGTGGACGGCCCATCGCCGTCTGGCCCATAATGCACTGCAACGCTGCTCCCAGCAGTCGCTCCACGGGGTCATCCAGAAACAGGCCCTCCACCTGAGACAAGTGCTGCTGGACTATAACGGCAGAGCTGCGGATCTCTCTGAGGATTTCACTGTAGCAGCCAGTAACGTCATCACCACACTGGCCTTTGGGAAAGAGTATGAGAAGAGTTCTGCAGAGCTGCAGAGACTGCATGGCTGTCTTAATGAGATCGTGTCTCTATGGGGCTCTCCCTGGATCTCTGCTCTGGACTCCTTCCCACTGCTCAGGAAATTGCCCAATCCTCCGTTCTCCCGTCTTCTGAAAGAGGTGGCCAGGAGAGATGACATCATCAGAACACATCTGGATGAGTATAAgATGCAGGCACCGAGCAAAACATCAGAGGAAGCCATTGCCATCACAAGCGCTCTCCTCAACGGCCTTGGGAAGCCCCAGGACACAACACAGGGAGTGGTCCTGACAGACACTCACGTCCACATGGCCACTGTGGACCTTCTGATCGGGGGAACAGAGACAACAGCTGCCTGGCTCAGCTGGACTGTGGCCTTTCTACTGCACAGGCCTGAGGTACAGTACAGAGTGTATGATGAGTTGTGTTCGGTGCTGGACGGGCGCTACCCTCAGTACAGTGACAGACACAGGCTGccagtgctgtgtgctgtgatcaGTGAGGTGCTCAGACTCAGACCTGTGGCTCCGCTAGCCGTGCCTCACAGAGCCATCAGAGACAGCAGtATTGCAGGCTACTTCATCCCTAAGAACACTGTCATCATCCCCAATTTGTTTGGGGCGCATCATGACCCTGCAGTGTGGACGGATCCCTATGCCTTCAAACCAGAGCGGTTCCTGGAGGGTGGGGGGGCCTCGACGCGTGCTCTCCTGCCTTTCGGCGGGGGCGCTCGGCTGTGTTTGGGGGAGGCCGTGGCCAAAATGGAATTGTTTCTGTTCACCGCCTACTTGTTGCGTGATTTCCAGTTCGTACCTGCTGAAAGCCAGACCTCTCTACCAGACCTGACAGGAGTAGCCAGTGTGGTACTCAAAGCCAAGGCCTACACAGTCATAGCACGGCCCAGACCTGGGCCTTGACCTCTCACAGAGTTTGTTCATGTACAGTGATCACATTACATTTCTATCAATCATTCGGCTCTAGAGGAAGTATTCTTATAAGAGAAGGCATATATTGTGTAGTATTGTGCAGTAATGGTGAAGTAATTGGAATGTATAGAATAATATTTTCTATTTTGTATAAATGCTTCCTCTTTTAACAACGAAGGATGCATTTCTGACTCCCTAAATAGATACACCATAGGTAGCCAGAATAAGAGTGCTGATAGGTTTATTAGAAGAGGGTTGGgctaaaggttaggggttaactCAGGGGTTAAAGGTTACTACTACTCTGGCAGCGCTGTAACAAACGGTTTGGGTTTGCGGAGGATCCTCATCAGGTTCCTGGACATGTAATAAGGCTTCTGCATAGTTCCATCATTCCTCTCTAGATCTTCCACTGTATGAGGGAGAAACACTGGAGtcactctactactctactactctactatacCTTACTATACCTTAATATATTATAccttactatactgtaccttACCATACCTTAATATATTATAccttactatactgtaccttACCATACCTTAATATATTATACCTTA

Function

NR:

description
PREDICTED: steroid 21-hydroxylase isoform X1

GO: NA

KEGG:

id description
K00513 CYP21A; steroid 21-monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937271.1 True 2596 mRNA 0.50 12 9175670 9189203

Neighbor

gene id symbol gene type direction distance location
LOC110534026 LOC106606081 coding upstream 6719 9149173 ~ 9168951 (+)
LOC110520726 LOC106605921 coding upstream 64898 9106304 ~ 9110772 (+)
LOC110506654 NA coding upstream 69825 9103512 ~ 9105845 (+)
LOC110520725 LOC106605921 coding upstream 74311 9090560 ~ 9101359 (+)
LOC110518388 LOC106598833 coding upstream 103221 8820359 ~ 9072449 (+)
LOC118937651 LOC106606075 coding downstream 22871 9212074 ~ 9216058 (+)
LOC110535224 aif1 coding downstream 32215 9221418 ~ 9229025 (+)
LOC110535231 LOC106573472 coding downstream 50693 9239896 ~ 9243612 (+)
LOC110520731 LOC106605982 coding downstream 120781 9309984 ~ 9315691 (+)
LOC118944051 LOC106573691 coding downstream 165819 9355022 ~ 9358422 (+)
G111394 NA non-coding upstream 4099 9171328 ~ 9171571 (+)
G111386 NA non-coding upstream 26592 9148856 ~ 9149078 (+)
G111384 NA non-coding upstream 29628 9145710 ~ 9146042 (+)
G111257 NA non-coding upstream 30764 9138410 ~ 9144906 (+)
G111258 NA non-coding upstream 44516 9124251 ~ 9131154 (+)
G111398 NA non-coding downstream 7042 9196245 ~ 9196496 (+)
G111422 NA non-coding downstream 29524 9218727 ~ 9223905 (+)
G111433 NA non-coding downstream 46146 9235349 ~ 9235558 (+)
G111405 NA non-coding downstream 56242 9245445 ~ 9247633 (+)
G110674 NA other upstream 1071750 8073366 ~ 8103920 (+)
G110644 NA other upstream 1240533 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1469181 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1871025 7282430 ~ 7304709 (+)
G111453 NA other downstream 141066 9330269 ~ 9331616 (+)
G111788 NA other downstream 251106 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 512837 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 585000 9773574 ~ 9776807 (+)

Expression


Co-expression Network