LOC110520763 (pgcp)


Basic Information

Item Value
gene id LOC110520763
gene name pgcp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10036264 ~ 10074921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937502.1
CGCATGGCTGTCCCTACTGCTTTGCCGTAGTCATTCATCACGGAAGTTATTTTTAAATTGATAAGAAATAGCTAGTTGGCTAGAAGGAATAACATTTATTGTGAATTATTCCATCTGTCAAGACGGTCAGCAATTTACCAACTAACTGTAGAATAAGATGCAGGGCCGGCAGATAAAACAATGTGGCCTTTCCTCACTGACTCTTTTGGCCACATTTCTCCATTGTAACTGTTTGCCACACAGTACTGGTGGAAAGCCATTTCCAGAGACCGCTAAAGAAATTGCCAGCTATGCAAAGGTAGCCAAGAGCATCATAGACTTGGCTGTGTATGGCAAAGCCCAGAACCGCTCCTATGAGAGACTGGCAGACTTCACAGATACAATAGGGAACCGTGTCAGTGGCTCTAAGAACCTGGACCTGGCTATCAAGTACATGTTCAGTGCCCTGAGGAAGGATGGGCTGGAGAACGTACATCTAGAACCAGTGAAGATCCCACACTGGGTCAGGGGAGTGGAGAGTGCCGTGATGCTACAGCCCCGGAACCACACCATGGCCATCCTTGGACTGGGCAGCAGTGTGGCTACACCCCAAGGAGGCATTGAAGCAGAGGTGCTGGTGGTGGAGTCTTTTGAGGAGCTGAAAAAAAGGCAGAAGGAAGCCATTGGGAAGATTGTGGTGTATAACCAGCCCTTTGTCAGCTATGGGGAGACTGTGCAGTACAGGGAGTTTGGGGCATCCAAGGCAGCTGAAGTAGGAGCTGTGGCTACTCTCATCCGGTCCATCACACCCTTCTCCATCAACAGTCCTCACACAGGCTGGCAGGACTACCAGGAGGGAGTGCAGAAGATccctaccgcctgtatcacagtGGAAGACGCCATGATGATGGCCAGGATGGCTAAGCGAGGCCAGAGGATTGTGGTCCGACTCACCATGAACGCCCAGACCTTCCCTGATGCTGACTCCTTCAACACTGTGGCTGAGATCATCGGCAGCGAGCACCCAGAACAGGTGGTGCTGCTCAGTGGTCATCTGGACAGCTGGGATGTGGGCCAGGGGGCCATGGATGATGGTGGTGGAGCGCTCATCTCCTGGGAGGCCTTGTCTCTGCTTAAAGACCTGGGTCTGCGTCCCAGAAGAACCCTCCGGACAGTGCTGTGGTCtgcagaggagcagggaggggttGGAGCGCAACAGTACTTCCAGCTTCACAAGGTGAACATCTCTAACTTTAACCTAGTGATGGAGTCTGACATGGGTACCTTCACCCCCCTGGGACTGCAGTTCACAGGCTCAGTCCAGGCCCGGGCTGTCATGGCTGAGGTGATGAAGCTACTGAAgcccatcaacaccaccaccctggAGGAACACGGAGAGGGAATTGATATAGAGATGTGGATGGATGCCGGCGTGCCAGGAGCCAGCCTGCACGTTGCAGACAGTAGATACTTCTGGTTCCACCACACCAACGGAGACACCATGTCTGTTCAGAGCCCCATAGAAATGAACCTGTGTTCGGCCCTGTGGGCGGTGGTGGCCTACGTAGTGGCTGACCTGGAGGAGATGCTGCCCAGGTAGTCCACTAGGACTGTCCTGCATCCTAAACGGCACCCTATCCCCTGTATAGTTTTGGGAGAAGAATATGGAGAATATGGTGCCATAAAAATGCTTTACTGTTGTTTGTCCTCCAGAAGGGCTTCCTGCAGTAACCTCTGTGAAATTATACCCCACTCTGGTTAAGTGGCTAAAGAAGAATTAATAGTGTGTATAAACCACACAATGTACAAAATGGAATTAAGTATTTTTGGCATATTATTTCCAGTCAATTTCTTTTATAATGATCACATATGTACTGCATGTTTCATGTTGACTGTCATTATGTCTAATCTGCCAATAAAGCTGGTCATTAATTAGACCAAGGTGCACGTGTA

Function

NR:

description
carboxypeptidase Q

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004180 carboxypeptidase activity molecular_function

KEGG:

id description
K01302 CPQ; carboxypeptidase Q

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937502.1 True 1932 mRNA 0.50 8 10036264 10074921

Neighbor

gene id symbol gene type direction distance location
LOC110507380 LOC106573899 coding upstream 397 10020205 ~ 10035867 (+)
LOC110493963 LOC106606027 coding upstream 21901 10007058 ~ 10014363 (+)
LOC110507293 LOC106606028 coding upstream 52962 9847951 ~ 9983302 (+)
LOC110520749 LOC106606080 coding upstream 190645 9821130 ~ 9845619 (+)
LOC110520735 LOC106573422 coding upstream 251091 9758328 ~ 9785173 (+)
LOC110507402 LOC106595324 coding downstream 47524 10122445 ~ 10150796 (+)
LOC110520765 NA coding downstream 97643 10172564 ~ 10184239 (+)
LOC110507434 LOC106584755 coding downstream 111184 10186105 ~ 10189115 (+)
LOC118937668 LOC106584755 coding downstream 142348 10217269 ~ 10219572 (+)
LOC110517641 LOC106584755 coding downstream 160819 10235740 ~ 10238379 (+)
G112180 NA non-coding upstream 6720 10028035 ~ 10029544 (+)
G112179 NA non-coding upstream 13759 10022256 ~ 10022505 (+)
G112133 NA non-coding upstream 20337 10014839 ~ 10015927 (+)
G112200 NA non-coding downstream 11063 10085984 ~ 10090231 (+)
G112241 LOC106584755 non-coding downstream 108630 10183551 ~ 10296699 (+)
G112273 NA non-coding downstream 183931 10258852 ~ 10301455 (+)
G112556 NA non-coding downstream 254629 10329550 ~ 10329961 (+)
G112566 NA non-coding downstream 271775 10346696 ~ 10346984 (+)
LOC118937659 NA other upstream 259813 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 312393 9701990 ~ 9742723 (+)
G111788 NA other upstream 592223 9440309 ~ 9444041 (+)
G111453 NA other upstream 704648 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 807239 9221418 ~ 9229025 (+)
G112697 NA other downstream 736597 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1165811 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1186633 11260912 ~ 11275480 (+)
G113285 NA other downstream 1340010 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1403055 11477976 ~ 11482741 (+)

Expression


Co-expression Network