LOC110507402 (LOC106595324)


Basic Information

Item Value
gene id LOC110507402
gene name LOC106595324
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10122445 ~ 10150796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937507.1
caggcagacatgaGGAACAGCACTACATACAGCCAGCCATGAGGAGGAGGATCCAACACAGATCAGTCCACTGACTGACAATGTAGTCTACATCACACAACTGTGTAGTGTGGATCCCTGTCCTGGATCTGGACCAGCAACAACAACTAACAAGACAACTGGTGATGAATTGGGATGAGTTCCACACTGACACTTGAGAGGACTACTCATCCATTCCTACTGATGGGAAGCGGCCATCTTTCTGGATCGACGGTCTACCTCTCAACCGTCTGATTGACGACAGGACAGGAAGACATGCTGTGAagagagacaagacagacagaagcCATAAAAGAGGACCGTTAGCCTGTGTTTCCTGCTGCCATGCCGTGGTACTTCCTGCCCTGCCAGCCCAGCTGCCACATGATCTGGCTGGTTCTGGCTGCCCTTCTGCTGCTACTGACGGgctatgtgtctgtgtctctggaaGAGCTGCCCAGGGGCCCAGGGGACATAGCTGGCAGCGGGTCCATGAGCGCCAGCACTAACACTAACGCTCGCCAGTACAACTCTATCCAGCACGGATCCTGCACCTATACCTTCCTGCTACCAGATAACGCTGGGGGGAACAGGCCGTGCTTGAcggaggaggagggggttggCAGCTCCAGCACCAGCCAGGGACAGGGCCAGTACCAGGGGAACACTCTACAGGGAGATGCCCCACTGAAAAAGCCCAAGCTCCCAGGACTGGCCCCGGCTCTGGGGAACCAGAGGATCCAACACCTGGAGAACGTCATGGACAACTACACACAGTGGCTTCACAAAatgGAGAGATATGTGAAGGACAGTCTGAATGTGGAGATGGCTCAGCTGCAGCAGAGTGCTGTCGACAatcacactgctgccatcttgaaTCTAGGCACCAACCTCCTGACCCAGACTGCTCAGCACACACGGAAGCTGACAGACGTAGAGATCCAGGTGTTGAATCAGACCTCCAGGCTGGAGATTCAGCTCTTGGAGAACTCTCTGTCCACCAACAAACTGGAGACCCAGCTCCTCCACCAATCTACAGAGATCAGCAAGCTGCACGACAAGAACAGGCTCTTAGAGCAGAAGATGCAGGAGCTGGAGTCTGGGCACCATGAGGAGCTGGTCACCTTCCAGGAGGAGAGGTCCAGCCTGCAGCAGCTGGTAGCCAGACAGAGCAGTGTGATCACAGAGCTGCAGACCCATCTAGACCAGGCCACTGGCAACAACAGTATCCTGCTTAGCCAACAACAGCAGCTCACTGAGACCGTCAACAGTCTGCTGAAACTCTGCTCTAAGGACAGAGGGTCTGGAGTGGTGGCAAACAGCAACCTTGCCTTTAAGCAAAGAGATTCATCTCATGAGGAGAGAAAGTATCGGGACTGCTCAGAAGTCTTTCAAGCTGGCTTCAACAACAGTGGATTATATACTATTCACATCAACACACAGGAGACCAAAAAGgtttACTGTAACATGGAGGCAGCAGGGGGAGGATGGTCCGTCATTCAGAGAAGAAAAGATGGAACCATGGACTTCCAGAGGACGTGGAAGGAGTACAAGATGGGCTTTGGGAGTCTGTTTGGAGAACACTGGCTGGGGAATGAGTTTGTGTTCCTGCTGACCAGCCAAAGGCCCTACAACCTGAGGGTGGAAGTGACCGACTGGGATGGACAGCAGGCCTTCTCCCACTATGACCGTTTCTACATCGGCAGCGAGAAGCAGAATTACAGgcTGTTCCTGAAGAGTCACAGTGGAACGGCAGGCAGACAGAGCAGCCTGGTCATCAACGGAGCAGACTTCAGTACCAAGGATATGGACAACGACAACTGCATCTGCAAATGTGCTCTCATGCTCACTGGGGGTTGGTGGTTCGATGCCTGTGGACCATCGAACCTGAACGGGATGTACTACAGTCATGGTCAGAACATGGGTAAACTGAATGGGATTAGGTGGCACTACTTCAAAGGGTCTAGTTACTCTCTCCATGCTACTACCATGATGATACGACCAGCAGACTTCTGAGAGGACCTTTTGGTGACTGTCGTTGGGTACGTTGTCCATAGACATATTGGCATCATTAGTCATGTTTCCATCCAACTGTTTTTATGCGATAAAGTAAAGTACTGTCCAACAGGTGTGACGGAAACACAAAATAGAAGGTGGGATAATTGTTTGTACTTTGACTTAAAAAATAGCAACCTAATTTAGTTTTCTATGAGGAACTTGGATTCTGACTTTCTGCTGCTTACATGTCCTCTTGAAAGACATTGATTGTTTGAGACAGTATGCTTGAGCACCAGCTCTGCAATGAATCAAACTGTAGAAGTGGGTTACATGAAGAGGATATGAATGTAAGATTTGGTGCTTTTGAAAGACTTTAATTTGTCTGGCTTTCATTTCTCTTTTCATTTGACTCTCATTTGTCTCCCTTTCATTTGTCTCTTTCATGTATCTGTTGTGTATTGTTCTTCTATGGGTAAGGTATTCCTGTTAACATGTTGTGAATCAGTGTACTGCTCTCTTAGTCTGCACTGTGGGCAGAGAAGCCTGATGGCCTAGACTGGATACACTTCAGAACActgttatggatattatttgcCTATATAGtggattgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaatgtactgtgttttatatcCTTATGTTTAAGGAatggtgtctatgtgtgtctcacCACACTTGAATATTTAATGGAATAGAGATAAAtaattgatgtcttcactttcaTGTAAGTTTTCAGTATTAAAAGCATTGTTGCTCTTCCTTTGTTGAACTTTGTAACAATGACAAAAGTACTTTTTTTGTGCCATGAATTAAAAATATTCCCCCTAAAAGCAGTGCCAAGCAT

Function

NR:

description
angiopoietin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937507.1 True 2946 mRNA 0.48 9 10122445 10150796

Neighbor

gene id symbol gene type direction distance location
LOC110520763 pgcp coding upstream 47524 10036264 ~ 10074921 (+)
LOC110507380 LOC106573899 coding upstream 86578 10020205 ~ 10035867 (+)
LOC110493963 LOC106606027 coding upstream 108082 10007058 ~ 10014363 (+)
LOC110507293 LOC106606028 coding upstream 139143 9847951 ~ 9983302 (+)
LOC110520749 LOC106606080 coding upstream 276826 9821130 ~ 9845619 (+)
LOC110520765 NA coding downstream 21768 10172564 ~ 10184239 (+)
LOC110507434 LOC106584755 coding downstream 35309 10186105 ~ 10189115 (+)
LOC118937668 LOC106584755 coding downstream 66473 10217269 ~ 10219572 (+)
LOC110517641 LOC106584755 coding downstream 84944 10235740 ~ 10238379 (+)
LOC110507415 LOC106584755 coding downstream 143003 10293799 ~ 10296592 (+)
G112200 NA non-coding upstream 32214 10085984 ~ 10090231 (+)
G112180 NA non-coding upstream 92901 10028035 ~ 10029544 (+)
G112179 NA non-coding upstream 99940 10022256 ~ 10022505 (+)
G112133 NA non-coding upstream 106518 10014839 ~ 10015927 (+)
G112241 LOC106584755 non-coding downstream 32755 10183551 ~ 10296699 (+)
G112273 NA non-coding downstream 108056 10258852 ~ 10301455 (+)
G112556 NA non-coding downstream 178754 10329550 ~ 10329961 (+)
G112566 NA non-coding downstream 195900 10346696 ~ 10346984 (+)
G112585 NA non-coding downstream 214597 10365393 ~ 10365667 (+)
LOC118937659 NA other upstream 345994 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 398574 9701990 ~ 9742723 (+)
G111788 NA other upstream 678404 9440309 ~ 9444041 (+)
G111453 NA other upstream 790829 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 893420 9221418 ~ 9229025 (+)
G112697 NA other downstream 660722 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1089936 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1110758 11260912 ~ 11275480 (+)
G113285 NA other downstream 1264135 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1327180 11477976 ~ 11482741 (+)

Expression


Co-expression Network