Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110520765 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 10172564 ~ 10184239 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zymogen granule membrane protein 16-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110520765 | True | 864 | mRNA | 0.54 | 6 | 10172564 | 10184239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507402 | LOC106595324 | coding | upstream | 21768 | 10122445 ~ 10150796 (+) |
| LOC110520763 | pgcp | coding | upstream | 97643 | 10036264 ~ 10074921 (+) |
| LOC110507380 | LOC106573899 | coding | upstream | 136697 | 10020205 ~ 10035867 (+) |
| LOC110493963 | LOC106606027 | coding | upstream | 158201 | 10007058 ~ 10014363 (+) |
| LOC110507293 | LOC106606028 | coding | upstream | 189262 | 9847951 ~ 9983302 (+) |
| LOC110507434 | LOC106584755 | coding | downstream | 1866 | 10186105 ~ 10189115 (+) |
| LOC118937668 | LOC106584755 | coding | downstream | 33030 | 10217269 ~ 10219572 (+) |
| LOC110517641 | LOC106584755 | coding | downstream | 51501 | 10235740 ~ 10238379 (+) |
| LOC110507415 | LOC106584755 | coding | downstream | 109560 | 10293799 ~ 10296592 (+) |
| LOC110535244 | ctnnb1 | coding | downstream | 181893 | 10366101 ~ 10402645 (+) |
| G112200 | NA | non-coding | upstream | 82333 | 10085984 ~ 10090231 (+) |
| G112180 | NA | non-coding | upstream | 143020 | 10028035 ~ 10029544 (+) |
| G112179 | NA | non-coding | upstream | 150059 | 10022256 ~ 10022505 (+) |
| G112133 | NA | non-coding | upstream | 156637 | 10014839 ~ 10015927 (+) |
| G112273 | NA | non-coding | downstream | 74613 | 10258852 ~ 10301455 (+) |
| G112556 | NA | non-coding | downstream | 145311 | 10329550 ~ 10329961 (+) |
| G112566 | NA | non-coding | downstream | 162457 | 10346696 ~ 10346984 (+) |
| G112585 | NA | non-coding | downstream | 181154 | 10365393 ~ 10365667 (+) |
| LOC118937659 | NA | other | upstream | 396113 | 9773574 ~ 9776807 (+) |
| LOC110506952 | LOC106606100 | other | upstream | 448693 | 9701990 ~ 9742723 (+) |
| G111788 | NA | other | upstream | 728523 | 9440309 ~ 9444041 (+) |
| G111453 | NA | other | upstream | 840948 | 9330269 ~ 9331616 (+) |
| LOC110535224 | aif1 | other | upstream | 943539 | 9221418 ~ 9229025 (+) |
| G112697 | NA | other | downstream | 627279 | 10811518 ~ 10826063 (+) |
| fbxo32 | fbxo32 | other | downstream | 1056493 | 11227497 ~ 11243074 (+) |
| elovl4a | LOC106606161 | other | downstream | 1077315 | 11260912 ~ 11275480 (+) |
| G113285 | NA | other | downstream | 1230692 | 11414931 ~ 11415178 (+) |
| G113313 | LOC102781083 | other | downstream | 1293737 | 11477976 ~ 11482741 (+) |
