LOC110507434 (LOC106584755)


Basic Information

Item Value
gene id LOC110507434
gene name LOC106584755
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10186105 ~ 10189115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937532.1
CCATCTAGAGCTGATGGAATGTTCAGCAGGTATAAATGCAGTTCTTAGAGGAAGCAGTAGACTAGAAGGAcctggcagagacagagagacaagaagCTTTCACAGGTTTTGACACACATCTCAAGATAGCACTGAAACACTGACCTGTCAGAATGTTCTTAATCCTGGTTGTCACAATGTTCTTGGCTGGCTGCTTGGCTTTGCCCATCAAAGATCCATACTCGTATTCCTCTGAGGTGGGTCAGGGACTTGGCACCCCATTTTCTTCCTACGGTGAGGGGCGCATTACGGGAGTCAGAGTGTGGGAGACCAAcaacaactattactactactactactactacaactacaacagCAACAACTACATCAGTGGGTTGCAGCTCAGATACGGTAGCAACTGGTCTCCTGTGTTTGGTGGTGAAGGGGGCTTAAAGCAGGAGATTGAGCTGTTTAATGATGAGGCCATCGTTGAGGTGTCTGGGAAGTACAACCCAGCAGACTACATCTGCTACCTGGTGTTAACCACCAACATGGGGCGCACTCTGTCAGCCGGCATGCCCAACCAGGTCTCCTTCAACTTCTACCCAGACAACATGGGCAATGAGCTGAGGCTGCTCAGTGGTCGCATCAATGGTGCCGGGATCACCTCCATCGGAGCCCACTGGGGATTGGTGGACATGGAAGGGGCTGGAAACAGTACTCTGGAAACAGCACTGGAAACAGTAACTCCTATTTTTTAGGGGGAAAAAAGTATGTCTTGCTCTTTGGGATGGTATCCCAGATACAGATTAAGCCTAATCCTGGACTAGTtactttcaatggagattctccattcaacatgctttttagtccaggagtaAACTTAATCTGGGTCCAGGAAACTGACCCTATATGTTGGACGGATGTTTGACATAGACGCTGACAGAACAGTTTTTTATATCACTATCTGATGGGGGCTTCATGAGAATTTAAACTGAATTAATTTgaaagtttaaaagtatttttgtaCTGCTTCAAGTGAGGAATCACctcaaaaatattccaaattattCAAAACATTCAAATTCATTCAGTTTAAATTCTCATGAAGCGCCCATCAGATAGTGAAATAAAAAACAGTTCTGTCAGCGTCCATCAGATAGGAATATTCAAACAGTCCTGTCAGCTTGGGTCAACATGCGTTGTTATCACATTTTATCACAATAAAGGAAAGATGCATATGGGATTTAAAGGATTAATTATATCTTTGATTAATGGAACAATCAAATATTATGGGGAGATAATAGTGTTTCAGGGTGTTTCACCTTCACTATTTTATACACTCTGCATTTGTTATTTGTTGATCCTTTTCTGCTACATCTGCTTCTGGACATTTTAATAAAAAGCATATCTTTAATCATTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937532.1 True 1402 mRNA 0.42 6 10186105 10189115

Neighbor

gene id symbol gene type direction distance location
LOC110520765 NA coding upstream 1866 10172564 ~ 10184239 (+)
LOC110507402 LOC106595324 coding upstream 35309 10122445 ~ 10150796 (+)
LOC110520763 pgcp coding upstream 111184 10036264 ~ 10074921 (+)
LOC110507380 LOC106573899 coding upstream 150238 10020205 ~ 10035867 (+)
LOC110493963 LOC106606027 coding upstream 171742 10007058 ~ 10014363 (+)
LOC118937668 LOC106584755 coding downstream 28154 10217269 ~ 10219572 (+)
LOC110517641 LOC106584755 coding downstream 46625 10235740 ~ 10238379 (+)
LOC110507415 LOC106584755 coding downstream 104684 10293799 ~ 10296592 (+)
LOC110535244 ctnnb1 coding downstream 177017 10366101 ~ 10402645 (+)
LOC110507508 LOC106605488 coding downstream 437471 10626586 ~ 10710360 (+)
G112200 NA non-coding upstream 95874 10085984 ~ 10090231 (+)
G112180 NA non-coding upstream 156561 10028035 ~ 10029544 (+)
G112179 NA non-coding upstream 163600 10022256 ~ 10022505 (+)
G112133 NA non-coding upstream 170178 10014839 ~ 10015927 (+)
G112273 NA non-coding downstream 69737 10258852 ~ 10301455 (+)
G112556 NA non-coding downstream 140435 10329550 ~ 10329961 (+)
G112566 NA non-coding downstream 157581 10346696 ~ 10346984 (+)
G112585 NA non-coding downstream 176278 10365393 ~ 10365667 (+)
LOC118937659 NA other upstream 409654 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 462234 9701990 ~ 9742723 (+)
G111788 NA other upstream 742064 9440309 ~ 9444041 (+)
G111453 NA other upstream 854489 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 957080 9221418 ~ 9229025 (+)
G112697 NA other downstream 622403 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1051617 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1072439 11260912 ~ 11275480 (+)
G113285 NA other downstream 1225816 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1288861 11477976 ~ 11482741 (+)

Expression


Co-expression Network