LOC110507454 (LOC106584706)


Basic Information

Item Value
gene id LOC110507454
gene name LOC106584706
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10262320 ~ 10267649 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036937549.1
GGGTCCTCTGAAAAAAAGCACCCTATGCAAAACATTACCAACCATACGAGCATGAAAAGGCAATACTTTCTGGCAGGCCCATTTACCTATCATCAAAAATAAGTTCCTCTTTATGCAACCACTCGCAACTCAGTGACATTTTGGGAATGGTATAGGCCTAACTGACCAAATTCATACAGTAGGCTTTGTTATGACGATGTTATGAATAACATTCAGACAGGTCCTAGATATTATTatctaaaataaacaaaaacgAGTTGTTTCACACATTTACAGAGTTCCGCAGATGTCTTGTTGCCTACTCAGGAAAGACGCGTCATTGCCATCTTTCCCACCttcctttgatttttttcttAATTCAGGTGGTCAGGATCCAAACGCGGTAGATGGATATTGAAAATGGAAGGAGCAGCGACGAGCACTGTGATAACGTCTACAAGCAGCAGCACGGAAAACTTTTCCACCTCTACTCTGGTTTACGACAGGCAGTTTCTTCGCACTGCTTCGGGGCTCCTCGTTTTCGCAGAAATAGTGTTTGGTCTGCTGGTATGGATGCTGATAGCAGGGACAGAGTACTTCCGTGTGCCTGCCTTTGGGTGGGTTATGTTTGTGGCCATCTTGTACTGGGTCCTGACGGTCATCTTCCTCATCATCTACCTGACCATGGCTTACAACAGGATCCCTCAGGTCCCCTGGACAACTGTGGGTCTGTTCTTCAACAGTAGTGCTACAGTGATGTATGTGGTGGCAGCAGCAGTGGACGCAGCCTCAATCAGCCATGCTGTTAAGGGACGCCATAACTACAACTGCTGGGTAGCATCCACATTCTTTGCCTTCCTGGTCACGCTCTGCTATGCAGGAAGTACATATTTAAGTTTTAAATTCTGGCGCTCGAGGGATGAGGAACAATAACCAATCACAAAGGACAGCTAAAGTATATCCGTTATGGAACGCATGAAGGACCTTGAAAAGTACCCATGGTTAAGTGTAATAACCACTCCTTCCCTTTGGAAGACATTTCTCTTTTCTCTGTTATATTTCTGTTATTTTAGAGTTATGGTGTGTTTCATCTGTTGGAATGACAGACCCTGAACCTCAGTGATGCTTTTACTTCTTATGCACTcatgagtttaaaaaaaatacatttggatgAAAATGACTGAAGCTAACAAAGTGGCTATTCTATTTTTCTGAAGCTGGAGATCAAAGCTTTAACTCCAATATTAAAATGGATTGGACAGTAATGTTGTCCCACACTAGATGGTGCCACAATACAAGGCTAAGAAACAGGGCTGATGAAGAACATTACAGTCAATTCTCTTTTTGATCATTCAAAAAAATGATCATATACGAATAATACATTTCACTAATAGGAGtcagctacactgaacaaaaatataaacgcaacatgcaactatttaaaagattttactgagttatggttcatataaggatatcagtcaattgaaataaattc

Function

NR:

description
CKLF-like MARVEL transmembrane domain-containing protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036937549.1 True 1477 mRNA 0.41 4 10262320 10267649

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-2 NA coding downstream 163343 10098902 ~ 10098977 (-)
LOC110493960 LOC106606059 coding downstream 255510 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 348989 9910470 ~ 9913331 (-)
LOC118937662 NA coding downstream 415463 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 858827 9392946 ~ 9403493 (-)
LOC110507471 LOC106584706 coding upstream 33056 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 49129 10316778 ~ 10354245 (-)
LOC110520767 ulk4 coding upstream 134270 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 447656 10715305 ~ 10718380 (-)
eif3h LOC100196680 coding upstream 469095 10736729 ~ 10808244 (-)
G112490 NA non-coding downstream 50797 10181054 ~ 10211523 (-)
G112438 NA non-coding downstream 86123 10086449 ~ 10176197 (-)
G112481 NA non-coding downstream 102307 10159560 ~ 10160013 (-)
G112474 NA non-coding downstream 111538 10149736 ~ 10150782 (-)
G112471 NA non-coding downstream 115946 10145740 ~ 10146374 (-)
G112557 NA non-coding upstream 61969 10329618 ~ 10329958 (-)
G112559 NA non-coding upstream 62443 10330092 ~ 10330324 (-)
G112586 NA non-coding upstream 97809 10365458 ~ 10365667 (-)
G112875 NA non-coding upstream 124309 10391958 ~ 10392200 (-)
G112876 NA non-coding upstream 124630 10392279 ~ 10392498 (-)
G112076 LOC105018850 other downstream 481865 9779011 ~ 9780455 (-)
G112066 NA other downstream 500655 9761300 ~ 9761665 (-)
G111955 NA other downstream 627190 9634537 ~ 9635130 (-)
G111855 NA other downstream 822382 9439362 ~ 9439938 (-)
G112567 NA other upstream 78822 10346471 ~ 10346935 (-)
G112928 NA other upstream 302793 10570442 ~ 10570808 (-)
G112965 NA other upstream 380616 10648265 ~ 10718658 (-)
G113096 NA other upstream 753392 11021041 ~ 11021734 (-)

Expression


Co-expression Network