ccka (cck-l)


Basic Information

Item Value
gene id ccka
gene name cck-l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10715305 ~ 10718380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124345.1
GTTCCAGCTGTACTCCCTCTACtgtacactcctctcctctactgttaTCAGACTGTTGAGCCCAGCCTGTGTGGACTGACTGAAGCAATGAATGCAGGCATCTGTGTATGTGTACTGCTGGCTGCGTTCTCTGGCAGCAGTTTGGGGCGCCCGTCGCACTCGCAGGATGAGGACAAGCCTGAGCCCCCCCAGCTCGACAGCGTTATGTCTCCCCAACACACACGCCACACCCGCTCAGCACCCTCCAGTGGCCAGCTCATCCCCTTCTCCAAACCGGCAGAGGACGAGGCAGAGGACCCCCGCACCAGCCTGCGCGAACTACTGGCAAGATTGATATCCAGGAAAGGATCATTGCAGAGGAGCTCGTCCCTGAGCAGCAGAGCCAGCGGTCCGGGTCCCAGCCACAAGATAAAGGACAGAGACTACCTGGGCTGGATGGACTTCGGACGCCGCAGTGCAGAGGAGTACGAGGAGTACTCCTCATAGAAACAGACGCACCACCACTAAATCCATCTCGATTATCAGAAAACAAAAAAATCATTGTCCCCAAAAGCTATATTTATTATGATGTATTTGATGTAAATGTGTTTGTAAAACTGATATGaagcaatatatatatacagtacgtaTACAGATTTTTGAAG

Function

NR:

description
PREDICTED: cholecystokinin-L isoform X1

GO:

id name namespace
GO:0030252 growth hormone secretion biological_process
GO:0007631 feeding behavior biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124345.1 True 644 mRNA 0.52 3 10715305 10718380

Neighbor

gene id symbol gene type direction distance location
LOC110520767 ulk4 coding downstream 103858 10400640 ~ 10611447 (-)
LOC118944052 NA coding downstream 361060 10316778 ~ 10354245 (-)
LOC110507471 LOC106584706 coding downstream 406012 10300705 ~ 10309293 (-)
LOC110507454 LOC106584706 coding downstream 447656 10262320 ~ 10267649 (-)
trnaa-ugc-2 NA coding downstream 616328 10098902 ~ 10098977 (-)
eif3h LOC100196680 coding upstream 18364 10736729 ~ 10808244 (-)
LOC118937678 NA coding upstream 40979 10759359 ~ 10762238 (-)
LOC110512108 rad21 coding upstream 93133 10811513 ~ 10826012 (-)
LOC110511734 LOC105023503 coding upstream 122186 10840566 ~ 11001122 (-)
LOC118937685 NA coding upstream 161476 10879856 ~ 10881390 (-)
G112960 NA non-coding downstream 74835 10640255 ~ 10640470 (-)
G112959 NA non-coding downstream 76605 10638384 ~ 10638700 (-)
G112956 NA non-coding downstream 79702 10635396 ~ 10635603 (-)
G112955 NA non-coding downstream 80332 10634723 ~ 10634973 (-)
G112952 NA non-coding downstream 86912 10628160 ~ 10628393 (-)
G113004 NA non-coding upstream 5597 10723977 ~ 10727044 (-)
G113015 NA non-coding upstream 45160 10763540 ~ 10765545 (-)
G113026 NA non-coding upstream 75511 10793891 ~ 10794318 (-)
G113029 NA non-coding upstream 83419 10801799 ~ 10802578 (-)
G112928 NA other downstream 144497 10570442 ~ 10570808 (-)
G112567 NA other downstream 368370 10346471 ~ 10346935 (-)
G112491 LOC106584755 other downstream 418306 10184147 ~ 10296999 (-)
LOC110493960 LOC106606059 other downstream 711662 10000730 ~ 10007883 (-)
G112076 LOC105018850 other downstream 934850 9779011 ~ 9780455 (-)
G113096 NA other upstream 302661 11021041 ~ 11021734 (-)
G113688 NA other upstream 492093 11210473 ~ 11218154 (-)
G113712 NA other upstream 592463 11310843 ~ 11312658 (-)
G113720 NA other upstream 604661 11323041 ~ 11325612 (-)

Expression


Co-expression Network