eif3h (LOC100196680)


Basic Information

Item Value
gene id eif3h
gene name LOC100196680
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10736729 ~ 10808244 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165087.1
ccctctttttTTCGGCGTGTTTCAGAATGGCTACTCGCAAGGAAACACCGTCGACACCAACCGCCCCGATGGCTTCCACGTCTCCGGGAGCAACTTTAGATTCACCCGTGAAACAGATTCAGATCGAAGGGCTGgtggTCCTGAAGATGATCAAGCATTACCAGGAGGAGGGTCAGGGTAGTGAGGTGGTTCAGGGTGTACTACTGGGCCTGGTAGTGGAGGACAGGTTAGAGATCACCAACTGTTTCCCCTTCCCCCAACACACTGAGGACGACGCCGACTTTGACGAAGtCCAGTATCAGATGGAGATGATGCGGTCTCTTCGTCATGTCAACATTGACCATCTTCATGTGGGCTGGTACCAGTCAACCTATTATGGATCATTTGTCAGCCGGGCCCTGCTGGACTCTCAGTTCAGTTACCAGCACGCCATCGAGGAGTCTGTCGTTCTCATCTACGATCCCATTAAGACCGCCCAGGGCTCCCTGTCCCTGAAGGCTTACAGGTTAACACCCAAACTGATGGAGATCTGCAAGGAGAAGGACTTCTCAGCCGAGGGatTGAAGAAGGCCCTGATTGGTTTTGAGCACATGTTTGAGGAGGTTCCCATCGTGATCAAGAACTCCCACCTGATCAACGTTCTGATGTGGGAACTGGAGGAGAAGTGTACTGTGGCCGACAAACACGAACTGCTCAACCTCTCCAGCAG
>TU129027
ctctctttcctccctctttttTTCGGCGTGTTTCAGAATGGCTACTCGCAAGGAAACACCGTCGACACCAACCGCCCCGATGGCTTCCACGTCTCCGGGAGCAACTTTAGATTCACCCGTGAAACAGATTCAGATCGAAGGGCTGgtggTCCTGAAGATGATCAAGCATTACCAGGAGGAGGGTCAGGGTAGTGAGGTGGTTCAGGGTGTACTACTGGGCCTGGTAGTGGAGGACAGGTTAGAGATCACCAACTGTTTCCCCTTCCCCCAACACACTGAGGACGACGCCGACTTTGACGAAGtCCAGTATCAGATGGAGATGATGCGGTCTCTTCGTCATGTCAACATTGACCATCTTCATGTGGGCTGGTACCAGTCAACCTATTATGGATCATTTGTCAGCCGGGCCCTGCTGGACTCTCAGTTCAGTTACCAGCACGCCATCGAGGAGTCTGTCGTTCTCATCTACGATCCCATTAAGACCGCCCAGGGCTCCCTGTCCCTGAAGGCTTACAGGTTAACACCCAAACTGATGGAGATCTGCAAGGAGAAGGACTTCTCAGCCGAGGGatTGAAGAAGGCCCTGATTGGTTTTGAGCACATGTTTGAGGAGGTTCCCATCGTGATCAAGAACTCCCACCTGATCAACGTTCTGATGTGGGAACTGGAGGAGAAGTGTACTGTGGCCGACAAACACGAACTGCTCAACCTCTCCAGCAGGTATGTGACTTGGTG

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit H

GO:

id name namespace
GO:0001731 formation of translation preinitiation complex biological_process
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165087.1 False 709 mRNA 0.53 5 10736744 10808233
TU129027 True 735 TUCP 0.52 5 10736729 10808244

Neighbor

gene id symbol gene type direction distance location
ccka cck-l coding downstream 18364 10715305 ~ 10718380 (-)
LOC110520767 ulk4 coding downstream 125297 10400640 ~ 10611447 (-)
LOC118944052 NA coding downstream 382499 10316778 ~ 10354245 (-)
LOC110507471 LOC106584706 coding downstream 427451 10300705 ~ 10309293 (-)
LOC110507454 LOC106584706 coding downstream 469095 10262320 ~ 10267649 (-)
LOC110512108 rad21 coding upstream 3280 10811513 ~ 10826012 (-)
LOC110511734 LOC105023503 coding upstream 32333 10840566 ~ 11001122 (-)
LOC118937685 NA coding upstream 71623 10879856 ~ 10881390 (-)
LOC118937688 NA coding upstream 250751 11058263 ~ 11060049 (-)
lratd2b LOC106573048 coding upstream 356880 11165113 ~ 11168638 (-)
G113004 NA non-coding downstream 9700 10723977 ~ 10727044 (-)
G112960 NA non-coding downstream 96274 10640255 ~ 10640470 (-)
G112959 NA non-coding downstream 98044 10638384 ~ 10638700 (-)
G112956 NA non-coding downstream 101141 10635396 ~ 10635603 (-)
G112955 NA non-coding downstream 101771 10634723 ~ 10634973 (-)
G113031 NA non-coding upstream 1354 10809587 ~ 10809812 (-)
G113036 NA non-coding upstream 21010 10829243 ~ 10829584 (-)
G113037 NA non-coding upstream 22177 10830410 ~ 10830648 (-)
G113038 NA non-coding upstream 24230 10832463 ~ 10832687 (-)
G112983 NA non-coding upstream 29409 10837642 ~ 10839764 (-)
G112965 NA other downstream 18086 10648265 ~ 10718658 (-)
G112928 NA other downstream 165936 10570442 ~ 10570808 (-)
G112567 NA other downstream 389809 10346471 ~ 10346935 (-)
G112491 LOC106584755 other downstream 439745 10184147 ~ 10296999 (-)
LOC110493960 LOC106606059 other downstream 733101 10000730 ~ 10007883 (-)
G113096 NA other upstream 212808 11021041 ~ 11021734 (-)
G113688 NA other upstream 402240 11210473 ~ 11218154 (-)
G113712 NA other upstream 502610 11310843 ~ 11312658 (-)
G113720 NA other upstream 514808 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 541109 11349342 ~ 11352741 (-)

Expression


Co-expression Network