Gene
RNA
| Item | Value |
|---|---|
| gene id | fbxo32 |
| gene name | fbxo32 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11227497 ~ 11243074 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fbxo32 | Acts upstream of or within several processes, including cardiac muscle tissue morphogenesis; heart contraction; and muscle cell cellular homeostasis. Located in cytoplasm. Is expressed in cardiac muscle cell; muscle; skeletal muscle cell; and yolk syncytial layer. Orthologous to human FBXO32 (F-box protein 32). |
| description |
|---|
| PREDICTED: F-box only protein 32 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001193326.1 | False | 3827 | mRNA | 0.42 | 10 | 11227497 | 11243074 |
| TU129356 | False | 2302 | TUCP | 0.49 | 2 | 11240732 | 11243069 |
| TU129359 | True | 442 | lncRNA | 0.45 | 2 | 11242592 | 11243069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512016 | LOC106564714 | coding | upstream | 16285 | 11202887 ~ 11211212 (+) |
| nsmce2 | LOC106606151 | coding | upstream | 130033 | 11084361 ~ 11097464 (+) |
| washc5 | kiaa0196 | coding | upstream | 144399 | 11031992 ~ 11083098 (+) |
| LOC110507508 | LOC106605488 | coding | upstream | 517137 | 10626586 ~ 10710360 (+) |
| LOC110535244 | ctnnb1 | coding | upstream | 824852 | 10366101 ~ 10402645 (+) |
| elovl4a | LOC106606161 | coding | downstream | 17838 | 11260912 ~ 11275480 (+) |
| LOC118944054 | NA | coding | downstream | 31607 | 11274681 ~ 11277557 (+) |
| LOC110520740 | LOC106592347 | coding | downstream | 64100 | 11307174 ~ 11324807 (+) |
| soga3a | LOC106593623 | coding | downstream | 84952 | 11328026 ~ 11373000 (+) |
| echdc1 | echdc1 | coding | downstream | 149868 | 11392942 ~ 11397308 (+) |
| G113210 | NA | non-coding | upstream | 54690 | 11172577 ~ 11172807 (+) |
| G113209 | NA | non-coding | upstream | 55148 | 11172041 ~ 11172349 (+) |
| G113208 | NA | non-coding | upstream | 55856 | 11171378 ~ 11171641 (+) |
| G113207 | NA | non-coding | upstream | 56384 | 11170905 ~ 11171113 (+) |
| G113205 | NA | non-coding | upstream | 60638 | 11165187 ~ 11166859 (+) |
| G113199 | NA | non-coding | downstream | 636 | 11243710 ~ 11245562 (+) |
| G113200 | NA | non-coding | downstream | 2539 | 11245613 ~ 11247356 (+) |
| G113238 | NA | non-coding | downstream | 10794 | 11253868 ~ 11254504 (+) |
| G113241 | NA | non-coding | downstream | 16665 | 11259739 ~ 11260059 (+) |
| G113197 | NA | non-coding | downstream | 30047 | 11273121 ~ 11300282 (+) |
| G112697 | NA | other | upstream | 401434 | 10811518 ~ 10826063 (+) |
| LOC118937659 | NA | other | upstream | 1451046 | 9773574 ~ 9776807 (+) |
| LOC110506952 | LOC106606100 | other | upstream | 1503626 | 9701990 ~ 9742723 (+) |
| G111788 | NA | other | upstream | 1783456 | 9440309 ~ 9444041 (+) |
| G111453 | NA | other | upstream | 1895881 | 9330269 ~ 9331616 (+) |
| G113285 | NA | other | downstream | 171857 | 11414931 ~ 11415178 (+) |
| G113313 | LOC102781083 | other | downstream | 234902 | 11477976 ~ 11482741 (+) |
| G113396 | NA | other | downstream | 465529 | 11708603 ~ 11709777 (+) |
| G114243 | NA | other | downstream | 1477334 | 12720408 ~ 12720693 (+) |
| G113236 | NA | non-coding | upstream | 8257 | 11233862 ~ 11234335 (+) |
| G113234 | NA | non-coding | upstream | 11117 | 11231174 ~ 11231475 (+) |
| G113233 | NA | non-coding | upstream | 11592 | 11230566 ~ 11231000 (+) |
