LOC118944054


Basic Information

Item Value
gene id LOC118944054
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11274681 ~ 11277557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961612.1
ATGCAAGCTAAGCTTTATCCAATTACAACTTGGCCAAGAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGCGACATTCAGTTAGAGACAGCGGAATCTAGAAGTGACATTCAGTTAGAGACAGCGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTTAGAGACAGCGGAATCTAGAAGCGACATACGGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTATGAGACATTGGAATCTAGAAGTGACATTCGGTTTGAGACAGTGGAATCTAGAAGAGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTTAGAGACAGTGGAATCTAGAAGAGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGAGACAGTGGAATCTAGAAGAGACAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTATGAGACATTGGAATCTAGAAGTGACATTCGGTTTGAGACAGTGGAATCTAGAAGAGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTTAGAGACAGTGGAATCTAGAAGAGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTCTGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGAGACAGTGGAATCTAGAAGAGACAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGGATCTAGAAGAGACATTCGGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGGATCTAGAAGAGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCAGAGACAGTGGAATCTAGAAGAGACAGTGGAATCTAGAAGCGACATTCGGTTAGAGGCAGTGGAATCTAGAAGAGACATTCGGTTAGAGACAGTGGAATCTAGAAGCGACATTCAGTTAGAGACAGTGGGATCTAGAAGAGACATTCGGTTAGAGGCAGTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGGATCTAGAAGAGACATTCGGTTAGAGACAGTGGAATCTAGAAGTGACATTCCGTTAGAGACAGTGGAATCTAGAAGAGACATTCAGTTAGAGGCAGTGGAATCTAGAAGAGACATTGGAATCTAGAAGAGACATTCAGTTAGAGACAGTGGAATCTAGAAGCTACATTTGGTTAGAGACAGTGGAATTTCGTCCGAaatgttttcttgttttttttatttcactgttCTGTCCTGGCTGCCTCCACATACAATATCACTAGTTGTCTTACTCAGTGAACGTGGAGCTGTTGAGCAGAGCCAAGTAGACATACAGTAACTG

Function

NR:

description
PREDICTED: uncharacterized protein PB18E9.04c-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961612.1 True 1860 mRNA 0.42 3 11274681 11277557

Neighbor

gene id symbol gene type direction distance location
fbxo32 fbxo32 coding upstream 31607 11227497 ~ 11243074 (+)
LOC110512016 LOC106564714 coding upstream 63469 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 177217 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 191583 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 564321 10626586 ~ 10710360 (+)
LOC110520740 LOC106592347 coding downstream 29617 11307174 ~ 11324807 (+)
soga3a LOC106593623 coding downstream 50469 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 115385 11392942 ~ 11397308 (+)
fbxo43 fbxo43 coding downstream 125386 11402943 ~ 11413713 (+)
LOC110510416 LOC106596421 coding downstream 138649 11416206 ~ 11459325 (+)
G113241 NA non-coding upstream 14622 11259739 ~ 11260059 (+)
G113238 NA non-coding upstream 20177 11253868 ~ 11254504 (+)
G113200 NA non-coding upstream 27325 11245613 ~ 11247356 (+)
G113199 NA non-coding upstream 29119 11243710 ~ 11245562 (+)
G113256 NA non-coding downstream 26723 11304280 ~ 11305549 (+)
G113258 NA non-coding downstream 33603 11311160 ~ 11312084 (+)
G113265 NA non-coding downstream 58957 11336514 ~ 11337268 (+)
G113276 NA non-coding downstream 83755 11361312 ~ 11368100 (+)
elovl4a LOC106606161 other upstream 1681 11260912 ~ 11275480 (+)
G112697 NA other upstream 448618 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1498230 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1550810 9701990 ~ 9742723 (+)
G113285 NA other downstream 137374 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 200419 11477976 ~ 11482741 (+)
G113396 NA other downstream 431046 11708603 ~ 11709777 (+)
G114243 NA other downstream 1442851 12720408 ~ 12720693 (+)
G114244 NA other downstream 1443173 12720730 ~ 12721315 (+)

Expression


Co-expression Network