Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944197 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12617506 ~ 12617694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOC569167 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039515.1 | True | 189 | mRNA | 0.39 | 1 | 12617506 | 12617694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937718 | LOC106590816 | coding | downstream | 63987 | 12549299 ~ 12553519 (-) |
| LOC118944056 | NA | coding | downstream | 172349 | 12435469 ~ 12445157 (-) |
| osr2 | LOC106591507 | coding | downstream | 312556 | 12299928 ~ 12304950 (-) |
| LOC118937706 | NA | coding | downstream | 528077 | 12085564 ~ 12089429 (-) |
| LOC118937715 | NA | coding | downstream | 654912 | 11961554 ~ 11962594 (-) |
| pop1 | LOC106561139 | coding | upstream | 22008 | 12639702 ~ 12673874 (-) |
| LOC118937724 | NA | coding | upstream | 65364 | 12683058 ~ 12683775 (-) |
| LOC118937723 | LOC106561136 | coding | upstream | 65399 | 12683093 ~ 12715610 (-) |
| LOC110525147 | LOC106570794 | coding | upstream | 195956 | 12813650 ~ 12890396 (-) |
| pabpc1a | LOC106593394 | coding | upstream | 306778 | 12924472 ~ 12934534 (-) |
| G114399 | NA | non-coding | downstream | 8562 | 12604971 ~ 12608944 (-) |
| G114391 | NA | non-coding | downstream | 25666 | 12588120 ~ 12591840 (-) |
| G114389 | NA | non-coding | downstream | 39142 | 12577859 ~ 12578364 (-) |
| G114364 | NA | non-coding | downstream | 141737 | 12474320 ~ 12475769 (-) |
| G114362 | NA | non-coding | downstream | 151106 | 12464565 ~ 12466400 (-) |
| G114401 | NA | non-coding | upstream | 827 | 12618521 ~ 12619052 (-) |
| G114400 | NA | non-coding | upstream | 5595 | 12623289 ~ 12624052 (-) |
| G114404 | NA | non-coding | upstream | 8005 | 12625699 ~ 12626684 (-) |
| G114405 | NA | non-coding | upstream | 17055 | 12634749 ~ 12634983 (-) |
| G114406 | NA | non-coding | upstream | 19069 | 12636763 ~ 12637000 (-) |
| G114402 | NA | other | downstream | 3826 | 12610669 ~ 12613680 (-) |
| G114390 | NA | other | downstream | 32366 | 12584027 ~ 12585140 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 958838 | 11471939 ~ 12290710 (-) |
| G113733 | LOC106606124 | other | downstream | 1264765 | 11349342 ~ 11352741 (-) |
| G113720 | NA | other | downstream | 1291894 | 11323041 ~ 11325612 (-) |
| G114424 | NA | other | upstream | 90133 | 12707827 ~ 12709315 (-) |
| G114442 | NA | other | upstream | 117620 | 12735314 ~ 12739157 (-) |
| LOC110507534 | LOC106606051 | other | upstream | 474398 | 13086169 ~ 13094428 (-) |
| LOC110513400 | snrk | other | upstream | 678139 | 13250306 ~ 13324680 (-) |
| G114812 | NA | other | upstream | 713054 | 13330748 ~ 13332506 (-) |
