LOC110507693 (LOC106574548)


Basic Information

Item Value
gene id LOC110507693
gene name LOC106574548
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13584124 ~ 13604148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938484.1
TTATTTTCCAGCCATTACCATatgcctgtcctccccaattaaggtgtcaccaacctcctgtcgCCTATGTATAATACACTGGTAGCATAgtgtaccctactctaccctattaCGCACTTTTGGATGTAGCTGAAATTTTACACGTTCTTCATTCAGCAATTTTCCATGTTTTACAACAATAACACTTATTGTGGAGTAGTTTGTCATAATGGACAAATATATTTTACACAGGCACTAAGCAGGCAGCCCTGGTCTGTCACCTCCAATAAGTTGTTCAGAGAACTCGGCACTTTGAGGGACTGAACGCATTCTAAATGGAGCAGAGATATTGGAGATAAAAAAAACTTAAATAGCTAACCATCCAATACAATTTTAAGTGGGAGTGTGGTGAGCGGCCGTGATGGGTGACACGGAGCTGGGTCTGTCTGCTGTACAGCCAGAGGAACTAGAACCGCAGAGCCCCTCcacagcctcctcctctccctcactctctctgccctcctccccttcctctggaTCCTACCACTATCAGCAGACCACCAGTCCCAGCCCCACTCACAGCGATGGTCCAGCCGCCTCCAGCCCACCCCTGGATGTCATCTCAGAGGGCGTGGGCGAGCTGACCCTGGTCATCGATCCCGAGGTGGCCAAGATGGCCTGCCAGGAGGTGCTGCAGAAGGTGAAGTTTCTCAAAGGCGAAAGTGAGGGGTCAGGTCCTGGGTCTGATGGTGGCAATAGCACAGACCAAACACTGGTCAACGGGACTGTACATACAGAGCCTATCAAGCCCCCAAAAATCCCCGGGGAGGAGGACTCTGAGGCACTGCCTCCAGGCTCGGTGAAAAGCGCGCGGCGGCGCCAGCGCCACAACCCCTCCAAGCAGTCGTGGCTGCTGCGGCTGTTTGAGTCCAAACTCTTTGACGTGTCAATGGCCATCTCCTATCTACACAACTCCAAGGAGCCGGGTGTGCAGGCCTACATCGGCAACCGTCTGTTCAGCTTCCGCCACGAGGAGGTGGACTTCTACCTGCCGCAGCTTCTCAACATGTACATCCACATGGACGAGGACGTGGGAGACGCCATCAAGCCCTACGTGGTGCACCGCTGCCGTCAGAGTATCTCCTTCTCGCTGCAGTGCGCCTGGCTGCTGGGCGCCTACTCCTCCGACATGCACATCTCCACACAGCGACACTCGCGCGGCACCAAGCTACGCAAACTCATCTTCTCCGACGAACTCAAACCAGCTGCAGTCCGTGCCCGCCAGCCACTGACGTTGGCCCCTTTCTGCCCACTTCCGACCGCTGCACCATCCCTGCACGGGCACGGCTTGGGCGGAGAGCACGGTCTGTCGCCTACTAAGCGCACGCATCAGCGCTCCAAGTCGGACGCCACGGTCAGCATCAGCCTGAGCAGCAACCTGAAGAGGACAGCGAGCAACCCCAAGGTGGAGAGCAACCAGGACGAGccGGCGCGTCTGGCACCGCAGAGAGAGTTCATCAAGTCCCTGATGGGCATTGGGAAGCGGCTGGCCACGCTGCCCACTAAGGAGCAGAAGACGTCCCGGCTCATCTCGGAGCTTTCGCTGCTCAACCACAAGCTGCCCGCCCGCGTCTGGCTGCCCACCGCCGCCTTCGACCACCACGTGGTGCGCGTCCCTCACACACAGGCTGTGGTGCTCAACTCCAAAGACAAGGCGCCGTACCTCATCTATGTGGAGGTTCTGGAGTGTGAGGACTTTGAGACGTCCAACGTTCCGGTGCGGATCTCCGAGACCAGGATCCGCAGCACGCGCTCAGTGGAGAACCTTCCGGACTGCGGCATCACGGCAGATCAGCGAGCCGGGGGCTTCTCAACGGTTCACAACTACGATGAGGATAACGAAGCCTGGTCTGTGGACGACATCGGGGATCTGCAGGTGGAGCTCCCAGAGTTCCACACCAACAGCTGTGACAACATCTCCCAGTTCTCAGTGGACAGCATCACCAGCCTGGACAGCAAGGAGCCCATCTTCATCGCTGCTGGAGACATCAGGCGGCGTCTCTCAGAGCAGCTAGCTCACACACCCACCACATTCAAACGGGACCCAGAGGACCCTTCAGCAGTGGCCCTCAAGGAGCCGTGGCAGGAGAAGGTTCAGCGGATAAGGGAGGGCTCCCCATATGGACACATCCCTACCTGGAGGTTGTTGTCAGTCATCGTCAAGTGTGGCGACGACCTTCGGCAAGAGCTCCTGGCCTCTCAAGTGCTGCAGCAGCTCCAGaTCATCTGGGAACAGGAGCGCGTGCCTATCTGGATCAAACCCTACAAGATCCTGGTGATCTCCTCTGACAGCGGCATGATTGAACCCATAGTCAACGCAGTGTCCATCCACCAGGTGAAGAAACAGAGCCAGATGTCTCTGCTGGACTACTTCCTGCAGGAACACGGTACCCACACCACCGAGGCCTTCCTCACGGCCCAGCGCAACTTTGTCCAGAGCTGTGCAGGCTACTGTCTCATCTGCTACCTGCTGCAGGTCaaagacagACACAATGGCAACATCCTGTTGGACGCTGAGGGCCACATCATCCACATAGACTTTGGCTTCATTCTGTCCAGCTCGCCCCGCAACCTGGGCTTCGAGACCTCTGCTTTCAAGCTCACCAACGAGTTTGTAGACgtgatgggaggtctggatggagacATGTTTAATTACTATAagatgctctgtctctctctaggtgatgggaggtctggatggagacatgtttaaTTACTATAagatgctctgtctctctctaggtga
>XM_036938477.1
CCATTACCATatgcctgtcctccccaattaaggtgtcaccaacctcctgtcgCCTATGTATAATACACTGGTAGCATAgtgtaccctactctaccctattaCGCACTTTTGGATGTAGCTGAAATTTTACACGTTCTTCATTCAGCAATTTTCCATGTTTTACAACAATAACACTTATTGTGGAGTAGTTTGTCATAATGGACAAATATATTTTACACAGGCACTAAGCAGGCAGCCCTGGTCTGTCACCTCCAATAAGTTGTTCAGAGAACTCGGCACTTTGAGGGACTGAACGCATTCTAAATGGAGCAGAGATATTGGAGATAAAAAAAACTTAAATAGCTAACCATCCAATACAATTTTAAGTGGGAGTGTGGTGAGCGGCCGTGATGGGTGACACGGAGCTGGGTCTGTCTGCTGTACAGCCAGAGGAACTAGAACCGCAGAGCCCCTCcacagcctcctcctctccctcactctctctgccctcctccccttcctctggaTCCTACCACTATCAGCAGACCACCAGTCCCAGCCCCACTCACAGCGATGGTCCAGCCGCCTCCAGCCCACCCCTGGATGTCATCTCAGAGGGCGTGGGCGAGCTGACCCTGGTCATCGATCCCGAGGTGGCCAAGATGGCCTGCCAGGAGGTGCTGCAGAAGGTGAAGTTTCTCAAAGGCGAAAGTGAGGGGTCAGGTCCTGGGTCTGATGGTGGCAATAGCACAGACCAAACACTGGTCAACGGGACTGTACATACAGAGCCTATCAAGCCCCCAAAAATCCCCGGGGAGGAGGACTCTGAGGCACTGCCTCCAGGCTCGGTGAAAAGCGCGCGGCGGCGCCAGCGCCACAACCCCTCCAAGCAGTCGTGGCTGCTGCGGCTGTTTGAGTCCAAACTCTTTGACGTGTCAATGGCCATCTCCTATCTACACAACTCCAAGGAGCCGGGTGTGCAGGCCTACATCGGCAACCGTCTGTTCAGCTTCCGCCACGAGGAGGTGGACTTCTACCTGCCGCAGCTTCTCAACATGTACATCCACATGGACGAGGACGTGGGAGACGCCATCAAGCCCTACGTGGTGCACCGCTGCCGTCAGAGTATCTCCTTCTCGCTGCAGTGCGCCTGGCTGCTGGGCGCCTACTCCTCCGACATGCACATCTCCACACAGCGACACTCGCGCGGCACCAAGCTACGCAAACTCATCTTCTCCGACGAACTCAAACCAGCTGCAGTCCGTGCCCGCCAGCCACTGACGTTGGCCCCTTTCTGCCCACTTCCGACCGCTGCACCATCCCTGCACGGGCACGGCTTGGGCGGAGAGCACGGTCTGTCGCCTACTAAGCGCACGCATCAGCGCTCCAAGTCGGACGCCACGGTCAGCATCAGCCTGAGCAGCAACCTGAAGAGGACAGCGAGCAACCCCAAGGTGGAGAGCAACCAGGACGAGccGGCGCGTCTGGCACCGCAGAGAGAGTTCATCAAGTCCCTGATGGGCATTGGGAAGCGGCTGGCCACGCTGCCCACTAAGGAGCAGAAGACGTCCCGGCTCATCTCGGAGCTTTCGCTGCTCAACCACAAGCTGCCCGCCCGCGTCTGGCTGCCCACCGCCGCCTTCGACCACCACGTGGTGCGCGTCCCTCACACACAGGCTGTGGTGCTCAACTCCAAAGACAAGGCGCCGTACCTCATCTATGTGGAGGTTCTGGAGTGTGAGGACTTTGAGACGTCCAACGTTCCGGTGCGGATCTCCGAGACCAGGATCCGCAGCACGCGCTCAGTGGAGAACCTTCCGGACTGCGGCATCACGGCAGATCAGCGAGCCGGGGGCTTCTCAACGGTTCACAACTACGATGAGGATAACGAAGCCTGGTCTGTGGACGACATCGGGGATCTGCAGGTGGAGCTCCCAGAGTTCCACACCAACAGCTGTGACAACATCTCCCAGTTCTCAGTGGACAGCATCACCAGCCTGGACAGCAAGGAGCCCATCTTCATCGCTGCTGGAGACATCAGGCGGCGTCTCTCAGAGCAGCTAGCTCACACACCCACCACATTCAAACGGGACCCAGAGGACCCTTCAGCAGTGGCCCTCAAGGAGCCGTGGCAGGAGAAGGTTCAGCGGATAAGGGAGGGCTCCCCATATGGACACATCCCTACCTGGAGGTTGTTGTCAGTCATCGTCAAGTGTGGCGACGACCTTCGGCAAGAGCTCCTGGCCTCTCAAGTGCTGCAGCAGCTCCAGaTCATCTGGGAACAGGAGCGCGTGCCTATCTGGATCAAACCCTACAAGATCCTGGTGATCTCCTCTGACAGCGGCATGATTGAACCCATAGTCAACGCAGTGTCCATCCACCAGGTGAAGAAACAGAGCCAGATGTCTCTGCTGGACTACTTCCTGCAGGAACACGGTACCCACACCACCGAGGCCTTCCTCACGGCCCAGCGCAACTTTGTCCAGAGCTGTGCAGGCTACTGTCTCATCTGCTACCTGCTGCAGGTCaaagacagACACAATGGCAACATCCTGTTGGACGCTGAGGGCCACATCATCCACATAGACTTTGGCTTCATTCTGTCCAGCTCGCCCCGCAACCTGGGCTTCGAGACCTCTGCTTTCAAGCTCACCAACGAGTTTGTAGACgtgatgggaggtctggatggagacatgtttaaTTACTATAAGATGCTCATGCTGCAGGGCCTGATAGCAGCACGTAAACACATGGACAAAGTCATCCAGATAGTGGAGATCATGCAGCAAGGCTCCCAGCTGCCCTGCTTCCACGGCTCCAGCACCATCCGGACCCTGAAGGAGCGTTTCCACATGAGCCTGACGGAGGAACAGCTGCAGGTCCTGGTGGAGCAGATGGTGGACGGATCCATGCGCTCCATCACCACCAAGCTCTATGACGGCTTCCAGTACCTCACCAACGGCATCAtgtgaacgtgtgtgtgcgtatgtacaGGACGTGTGTATGGAAAGgatacatgagtgtgtgtgtgtttctaaatgTGCAGTGGACATAcatggactggactggagaggccGCACCACGGGCAGAGACCACTCCCCCTACAAGTCCCCATacctctacagacagaatacattCATAATTTATAGTTGTGTTTCTAACACCACCTCAACCTTGGACTGATGTCTTTCCTCACAGGATTTAGACAGGAGATTGGAGAGGTTTAAGCTGTGGTTTTCATCTTTTCTTGCATCTTTATtcatatctctctgtttctctgtctgttttacCCCCTTATATCTTTCCATGTGCTTTGTTTTCTCCAATAGGAATGTGTTCTGTTTCTCCCCGTCTCTGCAGTATGTAATAGTACAGTTTCCCTGTGCCTCAGATATACATGACACTCACCAGCCCTTTAAATCAATCTGTCTCACCCCAGTGTGTGATGGTGTTCAGTCTCCATATTGACCATTTCATTCCAAATTCTCTATTACAGTGGTTTTCTCTACACTTTCTCAGTCATGGAATGAACACTTAGTGAAATGCTTAGGAACCAGCTCTGTTTCCATTGTCTTTGGACTGCCATTGACTGTTCTTGGTTGTCGAGGAGTGACATTGTTTGCTAGATGCACATAGTTCCCTCAAAATATGATCCGACAATAGTGGGTTGGAATGAGGTAGCGCCACGCTACCGATGTATCTTCTATCAACCTAATTTCTTCTGTAAGCTTTTGTGCATCACTTTGTATGAAGGGACATGACTCAACTGTGAAGACTTGTATTTCTACCTGGTATAattttggaggaagaagaagagccTACTGCTGTCTGTATTGAGCCACTAGAAACTGGTACTTGTGGGGAGGGTCTGAATAGACAAAAGGAGAGCAAAGCAGTTCTACAAGAACCAATGTGACTGAAGTACCTCAGAAGAACCCAGTATTTCACCAAAGCAGCAAAGGCTTTGAACATTGAGGAAAATAGTCAATTTACAAATGGTTGAATTTAAGGTGTTACTTCAACATTTCTAAATCAGAATGCTTTTGGATGGAGGTTGATAAAGATGGGGTCTATGAAATGTATGGCTGATTTCCTGTGTTTCGGGGCAGGATAGAGATGACTTGTCCATCCACCACTCTACATTCATCTCAATAGAATCTGGATTTTCACCCCTATTCCAGATGTCTGAATATGTAAGGGCAAACCAATTACAAGCTAGAATCCTAATTAAATGTATTTCTCCCAATAGTTTTTCTACTACCTTTAGTGTTTTTGTCAAACCTTTTTATTTCTTTATGAACTGTTATTTAATGGACCAGCTGTTATGATCACGTGACCTCCCTTAACTTGTACATTTTTCTTTGTAATAAATTTAATTTGTCTGTCAGGCTGTTGAAAATGA

Function

NR:

description
PREDICTED: phosphatidylinositol 4-kinase beta-like

GO: NA

KEGG:

id description
K19801 PI4KB; phosphatidylinositol 4-kinase B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938484.1 False 2785 mRNA 0.56 13 13584124 13601598
XM_036938477.1 True 4381 mRNA 0.51 13 13584135 13604148

Neighbor

gene id symbol gene type direction distance location
LOC110517609 sbp1 coding upstream 1519 13574497 ~ 13582605 (+)
LOC110507631 LOC106574283 coding upstream 196203 13383188 ~ 13387921 (+)
LOC110507612 NA coding upstream 253448 13324937 ~ 13330676 (+)
LOC118936508 ano10 coding upstream 342269 13193145 ~ 13241855 (+)
LOC110507515 LOC106575761 coding upstream 522818 13046879 ~ 13061306 (+)
LOC110520769 LOC106593286 coding downstream 156 13604304 ~ 13623972 (+)
LOC110513073 prune1 coding downstream 20485 13624633 ~ 13630579 (+)
LOC110520770 LOC106606072 coding downstream 28787 13632935 ~ 13643895 (+)
LOC110520780 LOC106574729 coding downstream 59691 13663839 ~ 13756558 (+)
LOC118944102 LOC106574856 coding downstream 311590 13915738 ~ 13920541 (+)
G114717 NA non-coding upstream 110377 13441854 ~ 13473747 (+)
G114712 NA non-coding upstream 152418 13429701 ~ 13431706 (+)
G114689 LOC106606048 non-coding upstream 239941 13338964 ~ 13344183 (+)
G114687 NA non-coding upstream 251671 13330758 ~ 13332453 (+)
G114897 NA non-coding downstream 79548 13683696 ~ 13684785 (+)
G114904 NA non-coding downstream 114084 13718232 ~ 13718727 (+)
G114990 NA non-coding downstream 130580 13734728 ~ 13734956 (+)
G115009 NA non-coding downstream 157675 13761823 ~ 13762180 (+)
G114323 NA other upstream 619194 12949360 ~ 12964930 (+)
G114263 NA other upstream 821297 12762232 ~ 12762827 (+)
G114244 NA other upstream 862809 12720730 ~ 12721315 (+)
G114243 NA other upstream 863431 12720408 ~ 12720693 (+)
G113396 NA other upstream 1874347 11708603 ~ 11709777 (+)
LOC110535330 LOC106574784 other downstream 357113 13961020 ~ 13976561 (+)
G115190 NA other downstream 537734 14141882 ~ 14144267 (+)
G115189 NA other downstream 630366 14234514 ~ 14236854 (+)

Expression


Co-expression Network