LOC110535774 (LOC106576081)


Basic Information

Item Value
gene id LOC110535774
gene name LOC106576081
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 15315600 ~ 15326000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938853.1
ttgcagatgccaggagaagaacgctacctgcccgaatgctttgtcaactgtaaagtttggtggagaaggaataaggGTCTGGGgtggtttttcatggttcaggctaggcccatTAGTTCCAGAGAAGGGAtgtcttaacgctacagcatacaatcacattctagatgattctgtgcttcaaactttgtggcaaccgtttgaggaaagccctttcctgtttcagcatgacattgccctcgtgcacaaagtgagttccatacagaaatgttttgaaaTTGGTGTGGAAGAAGTTGACTGGACTGCACAGGgcatctgacctcaaccccatcgagcacctttgggatgaattggaacgaccACTGGAGCCAGGCCTAACCTCACTAATGcctttgtggctgaatggaaacaagtccctgcagcgatgttccaacatctagtggaaagcctaaccaggagagtagaggctgttatagcaacaaagggggaccaactccatattaatgcccatgcttttggaataagatgttcgccgagcaagtgtccacatacttttgcatattttttttaaatatatataggTTTTCATCCATAATGGCGGAAGATAGCGAGTCCGCAGCCAGTCAGCAGAGCCTGGAGCTGGACGACCAGGACACCTGCGGAATAGATGGCGATAACGAGGAGGAGAATGAACACATGCAAGGgagtccGGGGGGAGACTTGGGGgctaagaagaagaagaagaaacagaagagaaagaaagagaagccAAGCTCTGGAGGGGCCAAGTCAGACTCTGCCTCAGACTCACAGGAGATAAAGAACCCAGGGCTGCCCATGCAGAAGCTGCAGGACATCCAGAGAGCCATGGAGTTGCTGTCCTGCCAGGGACCAGCTAAGAGCATCGACGAGGCCACCAAACACAAGTACCAGTTCTGGGACACACAGCCAGTACCTAAACTCAATGAGGTTGTAACCAGCCATGGGCCCATGGAGGCTGACAAGGACAACATCAGACAGGAGCCCTACTCTCTACCACAGGGCTTTATGTGGGACACGCTGGACCTCAGCAACGCTGACGTGctgaaGGAGTTGTACACCTTGTTGAATGAGAACTATGTGGAGGatgatgacaacatgtttagattTGATTACTCACCCAGCTTTCTCAAATGggcgtTGCGTCCTCCAGGCTGGTTGCCCCAGTGGCATTGTGGGGTGAGGGTTTCCTCCAATAAGAAACTGGTTGGTTTCATCAGTGCCATTCCTGCTGATATCCACATCTACGAcaccttaAAGAAAATGGTTGAGATCAACTTCCTGTGTGTTCATAAGAAATTGCGTTCAAAGCGTGTGGCTCCAGTTCTGATCAGGGAGATCACACGAAGGGTTAACTTGGAGGGTATATTCCAGGCCGTCTACACGGCAGGAGTGGTACTACCCAAACCTGTGTCTACCTGCAGGTACTGGCATCGTTCTCTGAACCCCAGGAAGCTGGTGGAGGTGAAATTCTCTCACCTGAGCAGAAACATGACGCTGCAGAGAACCATGAAACTGTACAGACTACCAGACAGCACTAAGACCCCGAGCTTGCGAGCGATGGAGAGGCGTGACGTGCGTCAGGTGACGGAGCTGCTACAGAAACACATGAGACGTTTCCAGCTGGCGCCCTCTATGGGCGAGGAGGAGGTGGCACACTGGTTCCTCCCTCAGGACAACATCATAGACACATTTGTCGTAGAGGGTGCTGGTGGTGTGTTGACAGACTTCACTAGTTTCTACACCCTGCCCTCCACAGTGATGCACCATCCACAGCACAGAAGTCTAAAGGCTGCTTACTCCTTCTacagcgttcacacacacactccactacTGGACCTGATGAATGACACTCTCATACTGGCCAAACTGaAAGGCTTTGATGTGTTTAATGCTCTGGACCTGATGGAGAACAAGGTGTTTCTGGAGAAGCTCAAATTTGGCATCGGAGACGGCAACCTGCAGTATTACCTCTTTAACTGGAAATGTCCCCCCATGGACCccgacatgGTTGGCCTTGTTCTTCAGTAACTAGTCTGTCTGTGACTGCTACACACTCAGAGGTCAAAGGTCTTCTTTGACCCCTAACATCGCTCTACCTGGACACACAGGTAGTCCCAAACTAGAAGAAGACAATGAcaacaatcaaccaatcaaagtGATCGGGAGGTGTGCATCACTTTGAGCATCTCTCCTGGATCATTTTTATCATGGAGAACATTCTCTCTGCTCACCCGGAACTCTTTTTAACCATCAACATCCTGAATGTGAAGTCATGCTCTGCCTGAGACAGACTcttgtacagtacacacacacacactacatgaagAGAAGGAAGACTTGcatccaaaatgttttttttgttgttttattcaAAAAGGTGCATTGGTAACCGTGTTTGTTGGACAGTGCAGAAATGTAGTAACCTGTGCATTTAATGCCAGAACACATTTATTCCTGTAGTGTGGAATATGGGGGGTGGGAGAGGAAAGATTCAACTAGCGTAGATGTTATTGACTTTGGTGTTCCTATGAACGGTTAAGAGGGGAGGGGATTCTAGGGATTTTTGAGGAAGAATGTATTTGAAGCACAAATCTTAAGTTCTTAACTGAGTGAAAGGCTCCTTAACAACCCCAGGTGCATTTTATATATTGattatttctgttttgtgtgtttagGTTTTTCAATATCTGAGTGTTTGAGAAACAGAAAATGCAGGATGAgaattttattattttaaaattgtttttaatttgttttgtgtgtttgcacCTAACAACATATTATTTTAAAAAGGTCCCATTTTTTTTCCCGGGCACAATTCTGATATTTAGGATTGTGCTTATATGTTGTGTGTTCTGTCACCATTCCTCCCATGTCTGTCAAACCGGCATCTTCACCTATAAATAAAGGTATTGGGTTGGAGTATCAG
>XM_036938857.1
CACCAGATGGCGCTATTTTCGACTAACCTCTTTGTTTTTcccatccctccctgtctcctgttcattcagcatattttttttaaatatatataggTTTTCATCCATAATGGCGGAAGATAGCGAGTCCGCAGCCAGTCAGCAGAGCCTGGAGCTGGACGACCAGGACACCTGCGGAATAGATGGCGATAACGAGGAGGAGAATGAACACATGCAAGGgagtccGGGGGGAGACTTGGGGgctaagaagaagaagaagaaacagaagagaaagaaagagaagccAAGCTCTGGAGGGGCCAAGTCAGACTCTGCCTCAGACTCACAGGAGATAAAGAACCCAGGGCTGCCCATGCAGAAGCTGCAGGACATCCAGAGAGCCATGGAGTTGCTGTCCTGCCAGGGACCAGCTAAGAGCATCGACGAGGCCACCAAACACAAGTACCAGTTCTGGGACACACAGCCAGTACCTAAACTCAATGAGGTTGTAACCAGCCATGGGCCCATGGAGGCTGACAAGGACAACATCAGACAGGAGCCCTACTCTCTACCACAGGGCTTTATGTGGGACACGCTGGACCTCAGCAACGCTGACGTGctgaaGGAGTTGTACACCTTGTTGAATGAGAACTATGTGGAGGatgatgacaacatgtttagattTGATTACTCACCCAGCTTTCTCAAATGggcgtTGCGTCCTCCAGGCTGGTTGCCCCAGTGGCATTGTGGGGTGAGGGTTTCCTCCAATAAGAAACTGGTTGGTTTCATCAGTGCCATTCCTGCTGATATCCACATCTACGAcaccttaAAGAAAATGGTTGAGATCAACTTCCTGTGTGTTCATAAGAAATTGCGTTCAAAGCGTGTGGCTCCAGTTCTGATCAGGGAGATCACACGAAGGGTTAACTTGGAGGGTATATTCCAGGCCGTCTACACGGCAGGAGTGGTACTACCCAAACCTGTGTCTACCTGCAGGTACTGGCATCGTTCTCTGAACCCCAGGAAGCTGGTGGAGGTGAAATTCTCTCACCTGAGCAGAAACATGACGCTGCAGAGAACCATGAAACTGTACAGACTACCAGACAGCACTAAGACCCCGAGCTTGCGAGCGATGGAGAGGCGTGACGTGCGTCAGGTGACGGAGCTGCTACAGAAACACATGAGACGTTTCCAGCTGGCGCCCTCTATGGGCGAGGAGGAGGTGGCACACTGGTTCCTCCCTCAGGACAACATCATAGACACATTTGTCGTAGAGGGTGCTGGTGGTGTGTTGACAGACTTCACTAGTTTCTACACCCTGCCCTCCACAGTGATGCACCATCCACAGCACAGAAGTCTAAAGGCTGCTTACTCCTTCTacagcgttcacacacacactccactacTGGACCTGATGAATGACACTCTCATACTGGCCAAACTGaAAGGCTTTGATGTGTTTAATGCTCTGGACCTGATGGAGAACAAGGTGTTTCTGGAGAAGCTCAAATTTGGCATCGGAGACGGCAACCTGCAGTATTACCTCTTTAACTGGAAATGTCCCCCCATGGACCccgacatgGTTGGCCTTGTTCTTCAGTAACTAGTCTGTCTGTGACTGCTACACACTCAGAGGTCAAAGGTCTTCTTTGACCCCTAACATCGCTCTACCTGGACACACAGGTAGTCCCAAACTAGAAGAAGACAATGAcaacaatcaaccaatcaaagtGATCGGGAGGTGTGCATCACTTTGAGCATCTCTCCTGGATCATTTTTATCATGGAGAACATTCTCTCTGCTCACCCGGAACTCTTTTTAACCATCAACATCCTGAATGTGAAGTCATGCTCTGCCTGAGACAGACTcttgtacagtacacacacacacactacatgaagAGAAGGAAGACTTGcatccaaaatgttttttttgttgttttattcaAAAAGGTGCATTGGTAACCGTGTTTGTTGGACAGTGCAGAAATGTAGTAACCTGTGCATTTAATGCCAGAACACATTTATTCCTGTAGTGTGGAATATGGGGGGTGGGAGAGGAAAGATTCAACTAGCGTAGATGTTATTGACTTTGGTGTTCCTATGAACGGTTAAGAGGGGAGGGGATTCTAGGGATTTTTGAGGAAGAATGTATTTGAAGCACAAATCTTAAGTTCTTAACTGAGTGAAAGGCTCCTTAACAACCCCAGGTGCATTTTATATATTGattatttctgttttgtgtgtttagGTTTTTCAATATCTGAGTGTTTGAGAAACAGAAAATGCAGGATGAgaattttattattttaaaattgtttttaatttgttttgtgtgtttgcacCTAACAACATATTATTTTAAAAAGGTCCCATTTTTTTTCCCGGGCACAATTCTGATATTTAGGATTGTGCTTATATGTTGTGTGTTCTGTCACCATTCCTCCCATGTCTGTCAAACCGGCATCTTCACCTATAAATAAAGGTATTGGGTTGGAGTATCAG
>XM_036938859.1
CTTCACCAACCAGACACAAAACGCAGCAGTCCGGGGCAGCACGCGTCCACGCTCGGATGGCTCGGTCCTGTGTAGGGGGTGGATGAGTTTCTTTGGATAATGAGCTCGCGCATACATCTAACgagtccGGGGGGAGACTTGGGGgctaagaagaagaagaagaaacagaagagaaagaaagagaagccAAGCTCTGGAGGGGCCAAGTCAGACTCTGCCTCAGACTCACAGGAGATAAAGAACCCAGGGCTGCCCATGCAGAAGCTGCAGGACATCCAGAGAGCCATGGAGTTGCTGTCCTGCCAGGGACCAGCTAAGAGCATCGACGAGGCCACCAAACACAAGTACCAGTTCTGGGACACACAGCCAGTACCTAAACTCAATGAGGTTGTAACCAGCCATGGGCCCATGGAGGCTGACAAGGACAACATCAGACAGGAGCCCTACTCTCTACCACAGGGCTTTATGTGGGACACGCTGGACCTCAGCAACGCTGACGTGctgaaGGAGTTGTACACCTTGTTGAATGAGAACTATGTGGAGGatgatgacaacatgtttagattTGATTACTCACCCAGCTTTCTCAAATGggcgtTGCGTCCTCCAGGCTGGTTGCCCCAGTGGCATTGTGGGGTGAGGGTTTCCTCCAATAAGAAACTGGTTGGTTTCATCAGTGCCATTCCTGCTGATATCCACATCTACGAcaccttaAAGAAAATGGTTGAGATCAACTTCCTGTGTGTTCATAAGAAATTGCGTTCAAAGCGTGTGGCTCCAGTTCTGATCAGGGAGATCACACGAAGGGTTAACTTGGAGGGTATATTCCAGGCCGTCTACACGGCAGGAGTGGTACTACCCAAACCTGTGTCTACCTGCAGGTACTGGCATCGTTCTCTGAACCCCAGGAAGCTGGTGGAGGTGAAATTCTCTCACCTGAGCAGAAACATGACGCTGCAGAGAACCATGAAACTGTACAGACTACCAGACAGCACTAAGACCCCGAGCTTGCGAGCGATGGAGAGGCGTGACGTGCGTCAGGTGACGGAGCTGCTACAGAAACACATGAGACGTTTCCAGCTGGCGCCCTCTATGGGCGAGGAGGAGGTGGCACACTGGTTCCTCCCTCAGGACAACATCATAGACACATTTGTCGTAGAGGGTGCTGGTGGTGTGTTGACAGACTTCACTAGTTTCTACACCCTGCCCTCCACAGTGATGCACCATCCACAGCACAGAAGTCTAAAGGCTGCTTACTCCTTCTacagcgttcacacacacactccactacTGGACCTGATGAATGACACTCTCATACTGGCCAAACTGaAAGGCTTTGATGTGTTTAATGCTCTGGACCTGATGGAGAACAAGGTGTTTCTGGAGAAGCTCAAATTTGGCATCGGAGACGGCAACCTGCAGTATTACCTCTTTAACTGGAAATGTCCCCCCATGGACCccgacatgGTTGGCCTTGTTCTTCAGTAACTAGTCTGTCTGTGACTGCTACACACTCAGAGGTCAAAGGTCTTCTTTGACCCCTAACATCGCTCTACCTGGACACACAGGTAGTCCCAAACTAGAAGAAGACAATGAcaacaatcaaccaatcaaagtGATCGGGAGGTGTGCATCACTTTGAGCATCTCTCCTGGATCATTTTTATCATGGAGAACATTCTCTCTGCTCACCCGGAACTCTTTTTAACCATCAACATCCTGAATGTGAAGTCATGCTCTGCCTGAGACAGACTcttgtacagtacacacacacacactacatgaagAGAAGGAAGACTTGcatccaaaatgttttttttgttgttttattcaAAAAGGTGCATTGGTAACCGTGTTTGTTGGACAGTGCAGAAATGTAGTAACCTGTGCATTTAATGCCAGAACACATTTATTCCTGTAGTGTGGAATATGGGGGGTGGGAGAGGAAAGATTCAACTAGCGTAGATGTTATTGACTTTGGTGTTCCTATGAACGGTTAAGAGGGGAGGGGATTCTAGGGATTTTTGAGGAAGAATGTATTTGAAGCACAAATCTTAAGTTCTTAACTGAGTGAAAGGCTCCTTAACAACCCCAGGTGCATTTTATATATTGattatttctgttttgtgtgtttagGTTTTTCAATATCTGAGTGTTTGAGAAACAGAAAATGCAGGATGAgaattttattattttaaaattgtttttaatttgttttgtgtgtttgcacCTAACAACATATTATTTTAAAAAGGTCCCATTTTTTTTCCCGGGCACAATTCTGATATTTAGGATTGTGCTTATATGTTGTGTGTTCTGTCACCATTCCTCCCATGTCTGTCAAACCGGCATCTTCACCTATAAATAAAGGTATTGGGTTGGAGTATCAG

Function

NR:

description
glycylpeptide N-tetradecanoyltransferase 2 isoform X1

GO: NA

KEGG:

id description
K00671 NMT; glycylpeptide N-tetradecanoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938853.1 False 2968 mRNA 0.47 13 15315600 15326000
XM_036938857.1 False 2483 mRNA 0.46 12 15316244 15326000
XM_036938859.1 True 2389 mRNA 0.47 12 15316471 15326000
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Neighbor

gene id symbol gene type direction distance location
LOC110535768 fam171a1 coding upstream 3683 15257269 ~ 15311917 (+)
LOC110507970 LOC106606114 coding upstream 145167 15160172 ~ 15170433 (+)
LOC110508003 LOC106605954 coding upstream 207120 15094896 ~ 15108480 (+)
LOC110520775 LOC106605953 coding upstream 224247 15079627 ~ 15091353 (+)
LOC110533650 LOC106592818 coding upstream 238981 15068668 ~ 15076619 (+)
LOC110535811 acbd7 coding downstream 3572 15329572 ~ 15336358 (+)
LOC110535783 LOC106606004 coding downstream 29848 15355848 ~ 15368210 (+)
LOC110534183 LOC106576069 coding downstream 48637 15374637 ~ 15400616 (+)
rundc3b LOC106576055 coding downstream 111892 15437892 ~ 15448698 (+)
LOC110535842 LOC106605985 coding downstream 122845 15448845 ~ 15451856 (+)
G116190 NA non-coding upstream 1992 15312846 ~ 15313608 (+)
G116219 NA non-coding upstream 10732 15295142 ~ 15304868 (+)
G116218 NA non-coding upstream 21621 15293471 ~ 15293979 (+)
G116213 NA non-coding upstream 28830 15286500 ~ 15286770 (+)
G116212 NA non-coding upstream 29316 15286046 ~ 15286284 (+)
G116239 NA non-coding downstream 71846 15397846 ~ 15398916 (+)
G116252 NA non-coding downstream 84895 15410895 ~ 15413673 (+)
G116269 NA non-coding downstream 152624 15478624 ~ 15479177 (+)
G116207 NA other upstream 43991 15271202 ~ 15271609 (+)
G115854 NA other upstream 284155 15030439 ~ 15031445 (+)
esrp1 LOC106605950 other upstream 308229 15005556 ~ 15026595 (+)
tmem67 LOC106606053 other upstream 436925 14870805 ~ 14882237 (+)
G116224 NA other downstream 11430 15337430 ~ 15337702 (+)
G117048 NA other downstream 857686 16182890 ~ 16185784 (+)

Expression

LOC110535774(LOC106576081) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 80.
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LOC110535774(LOC106576081) Expression in each Bioproject

Bar chart with 19 bars.
LOC110535774(LOC106576081) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network