Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936967 |
| gene name | LOC106606015 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16912850 ~ 16917506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| s100 calcium binding protein, partial |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036934598.1 | True | 612 | mRNA | 0.45 | 3 | 16912850 | 16917506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534232 | LOC106575974 | coding | upstream | 15026 | 16896300 ~ 16897824 (+) |
| LOC110536234 | LOC106575974 | coding | upstream | 21666 | 16889578 ~ 16891184 (+) |
| LOC110536226 | kcp2 | coding | upstream | 33498 | 16875994 ~ 16879352 (+) |
| LOC110536210 | LOC106574226 | coding | upstream | 36951 | 16871542 ~ 16875899 (+) |
| LOC110520867 | LOC106606111 | coding | upstream | 145627 | 16759736 ~ 16767223 (+) |
| LOC110536252 | LOC100136538 | coding | downstream | 15199 | 16932705 ~ 16934871 (+) |
| LOC118936983 | LOC106574877 | coding | downstream | 30925 | 16948431 ~ 16950598 (+) |
| LOC118937935 | LOC106606010 | coding | downstream | 52548 | 16970054 ~ 16972862 (+) |
| LOC110536275 | s10i | coding | downstream | 78124 | 16995630 ~ 16998361 (+) |
| LOC110536241 | LOC106606012 | coding | downstream | 81315 | 16998821 ~ 17001363 (+) |
| G117638 | NA | non-coding | upstream | 9605 | 16902902 ~ 16903245 (+) |
| G117636 | NA | non-coding | upstream | 11361 | 16901279 ~ 16901489 (+) |
| G117632 | NA | non-coding | upstream | 18853 | 16887027 ~ 16893997 (+) |
| G117609 | NA | non-coding | upstream | 59123 | 16847610 ~ 16853727 (+) |
| LOC110536287 | LOC106605892 | non-coding | downstream | 109372 | 17026878 ~ 17055189 (+) |
| G117701 | NA | non-coding | downstream | 124015 | 17041521 ~ 17042910 (+) |
| G117708 | NA | non-coding | downstream | 147667 | 17065173 ~ 17065377 (+) |
| G117711 | NA | non-coding | downstream | 151079 | 17068585 ~ 17072226 (+) |
| G117750 | NA | non-coding | downstream | 246679 | 17164185 ~ 17164471 (+) |
| G117048 | NA | other | upstream | 727066 | 16182890 ~ 16185784 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 1461162 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 1546061 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 1575148 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 1576492 | 15329572 ~ 15336358 (+) |
| G117704 | NA | other | downstream | 132626 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 155695 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 482507 | 17395343 ~ 17421816 (+) |
| G117735 | NA | other | downstream | 538259 | 17455765 ~ 17458022 (+) |
