XLOC_002055 (CABZ01059627.2)


Basic Information

Item Value
gene id XLOC_002055
gene name CABZ01059627.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 19573791 ~ 19575962 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003979
TCTTCAGCTTCTCTTTCAGCTTCACAAGGTACCACCTATGGTGTAATTACCCAGGCTCAAGGTGCAAGTCAGTCTGCTCCAGGATCTTCATCCCCATATACAACCATATCATTGCCCAAATATGTTACTAGTCAGTTGATAACTGGACCAAGTTCAAAGCAATTTACCTCCGTCTATGGCACCCAGACAGGATCCTCTGCCCCTTTCACTTTGAAAGAAAGTACCACATATGGTGGACAAATCCAGACTCAAGATGCCACAAGTCAATTAGTTTTAGGGTCTTCAACCCCATACATATCTGTATCATCACCTCAAGTTGTGACTAGTCAATTGACACCTGTGCCAGGTTCAAAGCCGGTTACCTCTGTCTATGGCACTCGGACTGGTTCTTCTGCTCCCTTCACTCTGCAAAGGTTACTCCAGGGTAAAGGTTCAACAAGCCAGGTTGTTTCAGTACCTTCAACCCCATATATAGCTGTATCATTGCCCCAAGGTGTTACTAGTCTGTCAACACCTGTGTCAAGTTCAAAGCAGGTTACCTCTGTCTATACCACCCAGACTGGACCCTCTGCCCCTTTCACTTTGCAAGAACTACTCCAGGGTCAAGATGCCACAAGCCAGTTTGTTTCAGGATCTTCAAGCCCGTATGTAGCTGTATCCATGCCCCAAGTTGTTACTAGTCAGTCAGCTGTGCCCTGTTCAAAGCAGGTTACATCTGTCTATGGCACTCAGACTGGTTCTTCTGCTCCCTTCACTCTGCAAAGACTACTCCAGGGTAAAGGTTCAACAAGCCCACTTGTATCAGTACCTTCAACCCCATACATATCTGTATCATTGCCCCAAGGTGTTACTAGTCAGTCGATGACATTGCCTAGTTCTAAGCAGATAACATCCGTCTATACCACCCAGACAGGATCCTCTGCCCCTTTCACTTTTAAAGAAAGTGATGCCACTAGTAAATTAGTTTTAGCATCTTCAACCCCTTACGTATCTGTATCATCACCCCAAGTTGTGACTAGTCAATTGACACCTGTGCCAGGTTCCAAGCCGCAGGTTACTTCTGTCTATACCACCCAAACAGGTTCTTCTGCCCCATTCACTTTGCAAGGAGTACTCCAAGGTCAAGATGCCACAAGCCAGTTTGTTTCGAGATCTTTGAGCCCATATGTAGCTTTTTCCTTGCCCCAAGTTGTTACTAGCCAGTCAGCTGTGCCCAGTTCAAAGCAGATTACCTCTGTCTATGGCACTCGGACAGGTTCTTCTGCTCCTTACACTTTGCAAGGAAGCACATATGGTGGACCAATCCTGCCACAAAATGCCAAAGATGTGTCTTCTACAGGATCTTCATCCTCTGTCCTCCTGACCTCAACTGGTGACATTTCTAATCCTTCCAGCAGCTTTTCTACCCTAAAACGTTACTACTCTGTTAAGGATTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000079681

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003979 True 1437 mRNA 0.46 5 19573791 19575962

Neighbor

gene id symbol gene type direction distance location
XLOC_002054 CABZ01059627.1 coding upstream 3445 19569052 ~ 19570346 (+)
XLOC_002053 atp6v1b2 coding upstream 7317 19554604 ~ 19566474 (+)
XLOC_002052 vsig8a coding upstream 22673 19525839 ~ 19551118 (+)
XLOC_002051 lrrtm4l1 coding upstream 179300 19310688 ~ 19394491 (+)
XLOC_002050 igsf9a coding upstream 479983 19026988 ~ 19093808 (+)
XLOC_002056 CABZ01059627.3 coding downstream 7327 19583289 ~ 19589733 (+)
XLOC_002057 zgc:173837 coding downstream 19047 19595009 ~ 19598009 (+)
XLOC_002058 CABZ01059623.1 coding downstream 26372 19602334 ~ 19725594 (+)
XLOC_002059 xpo7 coding downstream 494216 20070178 ~ 20146544 (+)
XLOC_002060 ppp3ccb coding downstream 604201 20180163 ~ 20234383 (+)
XLOC_002045 AL928714.1 non-coding upstream 771356 18798927 ~ 18802435 (+)
XLOC_002043 NA non-coding upstream 1291356 18240550 ~ 18282435 (+)
XLOC_002042 NA non-coding upstream 1502285 18007123 ~ 18071506 (+)
XLOC_002040 BX927277.1 non-coding upstream 1683588 17890089 ~ 17890203 (+)
XLOC_002035 dre-mir-218b non-coding upstream 1878451 17695265 ~ 17695340 (+)
XLOC_002063 NA non-coding downstream 801126 20377088 ~ 20381313 (+)
XLOC_002065 NA non-coding downstream 872505 20448467 ~ 20452630 (+)
XLOC_002066 NA non-coding downstream 925814 20501776 ~ 20502178 (+)

Expression


Co-expression Network