LOC110536756 (ndufa3)


Basic Information

Item Value
gene id LOC110536756
gene name ndufa3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18541050 ~ 18543176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622432.2
CCATTGACCGCAGCGGTCAAAGCATCACCGCAGGTTTCACGCTGTCAAACAACCTTTTTGTGTTGTTGCAACTGGCGCAATAATTATACGACATTATGTAGACTACAGTTCCCATGTTCCCCAGCCCGGCAATACTACAAACAGCAACATGGCAGGAATTGGAGCTTTCCTGAAGAATGCATGGAATAAGGAGCCAGTGGTATTGGCCGCCTGTGCAATTGGACTTCTCGCCGTTACTGTTCCATTAGTGAGTCCCTTAACGAAGTACTCGGGCATGATGAATGCAGCTGTGCCATACAACTACCCAGtccctgTGCGAAACAATGGCAAGATGGACGATGTCCCCAGCCACCCTTGTGACCCTAAAGGACCAAACCTGGACTGGATTAAAAGCCTGTAACCGTCCACATTCTCCTCCCTGTACAGATCACAGCCCgttgttcctgtctctctgtgtctgcttcTCAGTAGATGGCCCTCAATAAAGATGATCTATTTAATACCACCAA
>TU137371
CGGCAATACTACAAACAGCAACATGGCAGGAATTGGAGCTTTCCTGAAGAATGCATGGAATAAGGAGCCAGTGGTATTGGCCGCCTGTGCAATTGGACTTCTCGCCGTTACTGTTCCATTAGTGAGTCCCTTAACGAAGTACTCGGGCATGATGAATGCAGCTGTGCCATACAACTACCCAGtccctgTGCGAAACAATGGCAAGATGGACGATGTCCCCAGCCACCCTTGTGACCCTAAAGGACCAAACCTGGACTGGATTAAAAGCCTGTAACCGTCCACATTCTCCTCCCTGTACAGATCACAGCCCgttgttcctgtctctctgtgtctgcttcTCAGTAGATGGCCCTCAATAAAGATGATCTATTTAATACCACC
>TU137372
CCCCAAAGAGAGGCGGCAGGGCCAGGCCGGAGAAATCCTCCATCATCTGTGTGAGGGGTGGAAGGAGGAATAAGATCGTTCACCCCCTCATAAATCACCCCCTAGACGGTGTCACGAATCTACACTACATTTGACAAACAGGAATTGGAGCTTTCCTGAAGAATGCATGGAATAAGGAGCCAGTGGTATTGGCCGCCTGTGCAATTGGACTTCTCGCCGTTACTGTTCCATTAGTGAGTCCCTTAACGAAGTACTCGGGCATGATGAATGCAGCTGTGCCATACAACTACCCAGtccctgTGCGAAACAATGGCAAGATGGACGATGTCCCCAGCCACCCTTGTGACCCTAAAGGACCAAACCTGGACTGGATTAAAAGCCTGTAACCGTCCACATTCTCCTCCCTGTACAGATCACAGCCCgttgttcctgtctctctgtgtctgcttcTCAGTAGATGGCCCTCAATAAAGATGATCTATTTAATACCACC

Function

symbol description
ndufa3 Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFA3 (NADH:ubiquinone oxidoreductase subunit A3).

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622432.2 False 509 mRNA 0.49 4 18541050 18542623
TU137371 False 381 TUCP 0.43 4 18541052 18542497
TU137372 True 493 lncRNA 0.49 4 18541052 18543176

Neighbor

gene id symbol gene type direction distance location
LOC110536706 LOC106577267 coding downstream 25039 18496988 ~ 18516011 (-)
LOC110536509 LOC106593149 coding downstream 248274 18288741 ~ 18292776 (-)
khdc4 LOC106573819 coding downstream 263456 18268546 ~ 18277594 (-)
LOC110536568 LOC106573533 coding downstream 275264 18256000 ~ 18265786 (-)
LOC118938207 LOC106594169 coding downstream 290368 18249720 ~ 18250682 (-)
LOC110536762 prpf31 coding upstream 17170 18559793 ~ 18564193 (-)
LOC110536757 lmtk3 coding upstream 21980 18564603 ~ 18586875 (-)
LOC110536773 LOC106577219 coding upstream 44396 18587019 ~ 18590352 (-)
LOC110536796 rps9 coding upstream 60422 18603045 ~ 18605641 (-)
LOC110534340 LOC106605761 coding upstream 87372 18627912 ~ 18646884 (-)
G119126 NA non-coding downstream 2404 18536012 ~ 18538646 (-)
G119100 NA non-coding downstream 46527 18493276 ~ 18494523 (-)
G119090 NA non-coding downstream 56196 18484645 ~ 18484854 (-)
G119089 NA non-coding downstream 57358 18483143 ~ 18483692 (-)
G119137 NA non-coding upstream 41239 18583862 ~ 18584065 (-)
G119148 NA non-coding upstream 57572 18600195 ~ 18600493 (-)
G119447 NA non-coding upstream 59310 18601933 ~ 18602349 (-)
G119448 NA non-coding upstream 59848 18602471 ~ 18602685 (-)
G119458 NA non-coding upstream 84335 18626958 ~ 18627700 (-)
G119087 LOC106605728 other downstream 64297 18476454 ~ 18476753 (-)
G119000 NA other downstream 107382 18427562 ~ 18433668 (-)
LOC110534274 LOC105018985 other downstream 375937 18157725 ~ 18188504 (-)
LOC110536462 LOC108436080 other downstream 388264 18127347 ~ 18153075 (-)
G119512 LOC105019016 other upstream 256877 18799500 ~ 18801387 (-)
G119663 NA other upstream 505684 19048307 ~ 19049030 (-)
cacng6b LOC106606119 other upstream 941714 19484328 ~ 19499142 (-)
LOC118944062 LOC106575151 other upstream 1151066 19692971 ~ 19695564 (-)

Expression


Co-expression Network