LOC110536773 (LOC106577219)


Basic Information

Item Value
gene id LOC110536773
gene name LOC106577219
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18587019 ~ 18590352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940549.1
GACGTTATGACGTAATACTATTTTCGGGTGTATGTTTCCGGTTGTGGTTGAATAGCTCTTTTGTTGCTTGTTTACCTTTCagatgtgttaaatatattttctttGGTTTTATGCAAATATTTTATTCAGTCGGTAACAGCTGTACAAAACCCAGTGTCAGAATTACATCTCTGCGATTGAAATAGCTgttaaaatgttgttgtttttacaggAAATAGGTtaaggctagctaacgttagctagctagcgaactgGAGTTACAGTAGAGACTGACTGAATTGCAAACAACAGAAGTCAGGGTATGTTACGTTTTTGACACATTTTTGTTTAACTGTACAAGCCCTGGTCAAAACAAACACTCAACTTCAGAAGACAAATGAATATTCTACCAAAAAAGAGCTGGCATGTTCGCAACAAGGACAACGTCGCGCGCGTGCGCCGGGACGAGGCACAAGCCGCAGAAGAGGAGCGAGAGGTCCAACGCCGTGTGGAGCGAGCAGAGCAGGAGGCGCGAACAGAGCACCTGAGACAGAAGTCACGAGCTGCACTTCAACAGTCTGGAGCATGGAaggatgaaggagagggaggtgagagaggaggggaggggagtggaggagtggtggaaCACCTCAATCTATTTCCTCTGGAGGAGTCATCTGAGAAGAAAGGAAATGCAGAGTACCTCAAAGACCAGAAAGATGAAAAGGAGCGCGAGGAGCGTGCTATTGGTCTGCTAGTGTCCCTAGGCCCCCAAcccgggacagaggtaactccaTGGTACATGAAAACAGGCcaggaagaagagaaagacaaagaaaaggagaaagagaaagacaacaaAGGAAAGAGACTGCCACTCAGtcaagaggagaaggagaagagagacagacgaCTGAAAGACATGCTGGACCCCTTGAAAGAGATGAAGAAAGCACTGGCGGTGAAGGATAGAAAAGaacataagaagaagaagaaggagaagagggatagaggggagaggagaagcagTGGTGGAGAAAGCTCTATTGAAAGGTTGCGAGCGGAGCGACTGCAGAGAGAggcggaggagaagaggagagcccAGGCTCTGCTGGACCAGAAGAATGGAACAGGGAAAGAGAAGGAGCGAccaagggagacagaggagagggaaatgCCGTACAACAGTGCTTATTTCCCAGAGCTGGCCCGCAAGAGGCAGAGGAAAGACCGCAATGCCTGGAGAGATGGCATCTTTTGAAGTCATACATCATGCGATCATTGTTTGGGCAACGGACAGAGAACATTGAGGCATTCAAGATACATTTATTAGTATGTGAAAGACGCCGAAGACTTCGACAAGGACTAGAGAGCCTGGAAGGTTATTCAGTTGTATCCTAAGCAGACTTATTAATGTTTGTTGTCATTGAATGAACAATGCTATTTCTAATGAGGTAGAAAAAGAAAGGAAACCAATCAAGAGATTTGGGACAGCTGAGTTGGAGTCTGTCTGGCACCCTGCTCAAGTGTGAGACAATACAGAGATCATTTTGCTCCACAACACAAGACCACTGTTCAAGTTGGAGTGTGTTGGATGTTTTACTATTGATGGCAACATTGTGTCAATTCAAGTCTGTCAAGTCTTTTTTGTTTCTGATAATAGCATGTGCCAAtttaggaggtgtgtgtgtgtacatgcatctGTTCTATTTCACTATCTGATGTAGACAGAGTTTAGGGTGGTTGGCTCAACTATTATTGCACATTTTCCATTTCAATTAATTCAATAAAACTGTTAGGCCTGCCAAATAACAAAA

Function

NR:

description
leukocyte receptor cluster member 1 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940549.1 True 1796 mRNA 0.45 4 18587019 18590352

Neighbor

gene id symbol gene type direction distance location
LOC110536757 lmtk3 coding downstream 144 18564603 ~ 18586875 (-)
LOC110536762 prpf31 coding downstream 22826 18559793 ~ 18564193 (-)
LOC110536756 ndufa3 coding downstream 44396 18541050 ~ 18543176 (-)
LOC110536706 LOC106577267 coding downstream 71008 18496988 ~ 18516011 (-)
LOC110536509 LOC106593149 coding downstream 294243 18288741 ~ 18292776 (-)
LOC110536796 rps9 coding upstream 12693 18603045 ~ 18605641 (-)
LOC110534340 LOC106605761 coding upstream 39643 18627912 ~ 18646884 (-)
grwd1 grwd1 coding upstream 72252 18662604 ~ 18672410 (-)
LOC110536908 LOC106605765 coding upstream 98596 18688948 ~ 18693820 (-)
LOC110536927 LOC106577129 coding upstream 105481 18695833 ~ 18708631 (-)
G119137 NA non-coding downstream 2954 18583862 ~ 18584065 (-)
G119126 NA non-coding downstream 48373 18536012 ~ 18538646 (-)
G119100 NA non-coding downstream 92496 18493276 ~ 18494523 (-)
G119148 NA non-coding upstream 9843 18600195 ~ 18600493 (-)
G119447 NA non-coding upstream 11581 18601933 ~ 18602349 (-)
G119448 NA non-coding upstream 12119 18602471 ~ 18602685 (-)
G119458 NA non-coding upstream 36606 18626958 ~ 18627700 (-)
G119087 LOC106605728 other downstream 110266 18476454 ~ 18476753 (-)
G119000 NA other downstream 153351 18427562 ~ 18433668 (-)
khdc4 LOC106573819 other downstream 314912 18268546 ~ 18277594 (-)
LOC110534274 LOC105018985 other downstream 421906 18157725 ~ 18188504 (-)
G119512 LOC105019016 other upstream 209148 18799500 ~ 18801387 (-)
G119663 NA other upstream 457955 19048307 ~ 19049030 (-)
cacng6b LOC106606119 other upstream 893985 19484328 ~ 19499142 (-)
LOC118944062 LOC106575151 other upstream 1103337 19692971 ~ 19695564 (-)

Expression


Co-expression Network