Item | Value |
---|---|
gene id | ttyh1 |
gene name | LOC106592928 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 18721415 ~ 18755200 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
protein tweety homolog 1-like isoform X5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036940656.1 | False | 3182 | mRNA | 0.50 | 16 | 18721415 | 18755200 |
XM_036940667.1 | False | 2969 | mRNA | 0.51 | 14 | 18721417 | 18752689 |
XM_036940662.1 | False | 2756 | mRNA | 0.52 | 15 | 18721417 | 18754197 |
XM_036940672.1 | False | 2963 | mRNA | 0.51 | 14 | 18721418 | 18752689 |
XM_036940671.1 | False | 2671 | mRNA | 0.51 | 14 | 18721418 | 18754197 |
XM_036940649.1 | False | 3312 | mRNA | 0.49 | 16 | 18721418 | 18755200 |
XM_036940676.1 | False | 3567 | mRNA | 0.48 | 14 | 18721418 | 18755200 |
XM_036940680.1 | False | 2605 | mRNA | 0.51 | 15 | 18721420 | 18754156 |
XM_036940678.1 | True | 2646 | mRNA | 0.51 | 15 | 18721420 | 18754202 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
leng9 | LOC106605766 | coding | upstream | 1016 | 18707635 ~ 18720399 (+) |
cdc42ep5 | LOC106605762 | coding | upstream | 63621 | 18652960 ~ 18657794 (+) |
LOC110536807 | LOC106577172 | coding | upstream | 99835 | 18606074 ~ 18621580 (+) |
LOC110536748 | NA | coding | upstream | 164818 | 18545006 ~ 18556597 (+) |
LOC110536755 | tfpt | coding | upstream | 176033 | 18542485 ~ 18545382 (+) |
ube2s | ube2s | coding | downstream | 5643 | 18760843 ~ 18767906 (+) |
LOC118938256 | NA | coding | downstream | 18092 | 18773292 ~ 18797176 (+) |
si:dkeyp-69b9.6 | LOC106605771 | coding | downstream | 42573 | 18797773 ~ 18806085 (+) |
dbpb | LOC106605773 | coding | downstream | 54156 | 18809356 ~ 18818700 (+) |
ntd5 | LOC106605775 | coding | downstream | 68131 | 18823331 ~ 18843970 (+) |
G119159 | grwd1 | non-coding | upstream | 58304 | 18662619 ~ 18663111 (+) |
G119076 | NA | non-coding | upstream | 128600 | 18592511 ~ 18592815 (+) |
G119071 | NA | non-coding | upstream | 135336 | 18585876 ~ 18586079 (+) |
G119066 | NA | non-coding | upstream | 141003 | 18580204 ~ 18580412 (+) |
G119065 | NA | non-coding | upstream | 142316 | 18578720 ~ 18579099 (+) |
G119241 | NA | non-coding | downstream | 66688 | 18821888 ~ 18822563 (+) |
G119245 | stl2 | non-coding | downstream | 179473 | 18934673 ~ 18992769 (+) |
G119330 | NA | non-coding | downstream | 297608 | 19052808 ~ 19057561 (+) |
G119317 | NA | non-coding | downstream | 306896 | 19062096 ~ 19063167 (+) |
G119160 | NA | other | upstream | 49095 | 18670513 ~ 18672320 (+) |
G119153 | LOC106605761 | other | upstream | 85374 | 18633839 ~ 18636041 (+) |
LOC110536658 | LOC106577300 | other | upstream | 244281 | 18457284 ~ 18481741 (+) |
G117735 | NA | other | upstream | 1263393 | 17455765 ~ 17458022 (+) |
LOC110520798 | fam189b | other | upstream | 1299755 | 17395343 ~ 17421816 (+) |
LOC110503718 | LOC102193556 | other | downstream | 501386 | 19131905 ~ 19259074 (+) |
G119794 | u2af2 | other | downstream | 751451 | 19506651 ~ 19507338 (+) |
LOC110537095 | LOC106576906 | other | downstream | 770994 | 19526163 ~ 19528660 (+) |
LOC110537226 | LOC106575133 | other | downstream | 921535 | 19676656 ~ 19683059 (+) |