Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534362 |
| gene name | LOC106575226 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 19392737 ~ 19433631 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: voltage-dependent calcium channel gamma-7 subunit-like |
| id | name | namespace |
|---|---|---|
| GO:0006816 | calcium ion transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K04872 | CACNG7; voltage-dependent calcium channel gamma-7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036940854.1 | True | 2056 | mRNA | 0.52 | 6 | 19392737 | 19433631 |
19,360,000
19,370,000
19,380,000
19,390,000
19,400,000
19,410,000
19,420,000
19,430,000
19,440,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512786 | LOC105019084 | coding | upstream | 45437 | 19307576 ~ 19347300 (+) |
| LOC110503718 | LOC102193556 | coding | upstream | 133663 | 19131905 ~ 19259074 (+) |
| LOC110520830 | LOC106605779 | coding | upstream | 392527 | 18994838 ~ 19000210 (+) |
| LOC118938275 | stl2 | coding | upstream | 401370 | 18984795 ~ 18991367 (+) |
| stl2 | stl2 | coding | upstream | 415226 | 18971209 ~ 18977511 (+) |
| LOC110537022 | LOC106576929 | coding | downstream | 10500 | 19444131 ~ 19481383 (+) |
| LOC110537095 | LOC106576906 | coding | downstream | 92532 | 19526163 ~ 19528660 (+) |
| LOC110537107 | LOC106605819 | coding | downstream | 132248 | 19565879 ~ 19579511 (+) |
| LOC110537165 | LOC106605824 | coding | downstream | 163882 | 19597513 ~ 19599416 (+) |
| LOC110537142 | LOC106576877 | coding | downstream | 203803 | 19637434 ~ 19645326 (+) |
| G119792 | NA | non-coding | upstream | 1985 | 19390447 ~ 19390752 (+) |
| G119785 | NA | non-coding | upstream | 40019 | 19352427 ~ 19352718 (+) |
| G119445 | NA | non-coding | upstream | 42321 | 19350208 ~ 19350416 (+) |
| G119434 | NA | non-coding | upstream | 63325 | 19326050 ~ 19329412 (+) |
| G119429 | NA | non-coding | upstream | 85815 | 19304421 ~ 19306922 (+) |
| G119844 | NA | non-coding | downstream | 29697 | 19463328 ~ 19463916 (+) |
| G119855 | NA | non-coding | downstream | 58790 | 19492421 ~ 19492639 (+) |
| G119856 | LOC106606119 | non-coding | downstream | 59294 | 19492925 ~ 19494124 (+) |
| G119795 | NA | non-coding | downstream | 71235 | 19504866 ~ 19506500 (+) |
| G119866 | NA | non-coding | downstream | 85310 | 19518941 ~ 19519677 (+) |
| G119245 | stl2 | other | upstream | 431272 | 18934673 ~ 18992769 (+) |
| G119160 | NA | other | upstream | 720417 | 18670513 ~ 18672320 (+) |
| G119153 | LOC106605761 | other | upstream | 756696 | 18633839 ~ 18636041 (+) |
| LOC110536658 | LOC106577300 | other | upstream | 915603 | 18457284 ~ 18481741 (+) |
| G119794 | u2af2 | other | downstream | 73020 | 19506651 ~ 19507338 (+) |
| LOC110537226 | LOC106575133 | other | downstream | 243104 | 19676656 ~ 19683059 (+) |
| G119952 | nat14 | other | downstream | 268468 | 19702099 ~ 19703788 (+) |
| LOC110537243 | LOC106576860 | other | downstream | 334639 | 19768270 ~ 19778335 (+) |
