Item | Value |
---|---|
gene id | LOC110537257 |
gene name | LOC106576842 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 19833389 ~ 19892698 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ephrin type-B receptor 5-like isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036941059.1 | False | 4458 | mRNA | 0.53 | 19 | 19833389 | 19892695 |
XM_036941053.1 | False | 4455 | mRNA | 0.53 | 19 | 19839881 | 19892697 |
XM_036941057.1 | True | 4447 | mRNA | 0.53 | 19 | 19839881 | 19892698 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110537251 | LOC106605841 | coding | upstream | 4785 | 19796394 ~ 19828604 (+) |
LOC110537243 | LOC106576860 | coding | upstream | 55058 | 19768270 ~ 19778335 (+) |
LOC118944064 | NA | coding | upstream | 133870 | 19698491 ~ 19699519 (+) |
LOC110537226 | LOC106575133 | coding | upstream | 150330 | 19676656 ~ 19683059 (+) |
LOC110537142 | LOC106576877 | coding | upstream | 188063 | 19637434 ~ 19645326 (+) |
ecac | ecac | coding | downstream | 5621 | 19898319 ~ 19910352 (+) |
LOC110537283 | mprd | coding | downstream | 53392 | 19946090 ~ 19953207 (+) |
LOC110537299 | LOC106605834 | coding | downstream | 71216 | 19963914 ~ 19971980 (+) |
casp2 | LOC106605831 | coding | downstream | 125904 | 20018602 ~ 20030933 (+) |
LOC110534391 | clcn1 | coding | downstream | 139193 | 20031891 ~ 20093717 (+) |
G120018 | NA | non-coding | upstream | 12003 | 19819972 ~ 19821386 (+) |
G119986 | NA | non-coding | upstream | 74664 | 19758458 ~ 19758725 (+) |
G119899 | NA | non-coding | upstream | 83165 | 19660907 ~ 19750224 (+) |
G119955 | LOC106605829 | non-coding | upstream | 119954 | 19710482 ~ 19713435 (+) |
G119893 | NA | non-coding | upstream | 147860 | 19683793 ~ 19685529 (+) |
G120059 | grl1 | non-coding | downstream | 31374 | 19924072 ~ 19928477 (+) |
G120079 | NA | non-coding | downstream | 64996 | 19957694 ~ 19957965 (+) |
G120085 | NA | non-coding | downstream | 68276 | 19960974 ~ 19961182 (+) |
G120082 | NA | non-coding | downstream | 94705 | 19987403 ~ 19990796 (+) |
G119952 | nat14 | other | upstream | 129601 | 19702099 ~ 19703788 (+) |
LOC110537095 | LOC106576906 | other | upstream | 304729 | 19526163 ~ 19528660 (+) |
G119794 | u2af2 | other | upstream | 326051 | 19506651 ~ 19507338 (+) |
zyx | zyx | other | downstream | 253035 | 20145710 ~ 20165887 (+) |
G120211 | NA | other | downstream | 278384 | 20171082 ~ 20171381 (+) |
LOC110537348 | LOC106575899 | other | downstream | 286710 | 20179254 ~ 20185414 (+) |