LOC110537275 (grl1)


Basic Information

Item Value
gene id LOC110537275
gene name grl1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19924063 ~ 19928533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623198.2
TGTCCGTCAGCGCAAAGGACGTTCATTGGTCTAAATAACTCAAATTGGGCGTGACggtatttgttgttgtttctggGGCAAGAAGTAGCTAGCTGGTTAGAACAGTCGGCTATTTAAGAATATATTTCGTTTAAATAATTTCATCCAAAATAACTGTTCGTCGTGCTCATTATATGATAGCGTTGGTTACGTGAAGAGTCGGTGGGAAAGATCGGTGTGGAATTTTCacttgtatttgtttttattacGTTTTTCCAAAGAAGatggACAGTCAGTACCAGCGCTCTGTACCACTGGAAGTGAGGAGGGCAGAGGGTGAGAGGGTGCGAGCCAAGCATCCCGACAAGATACCAATCATTGTGGAGAGGGCTACCAGGTCGAGAGCTCCTGACCTGGACAAGAAGAAGTACCTTGTGCCCTCTGACCTCACAGtGGGTCAACTGTGCTTCCTGATCCGACAACGTGTGTCTATGAGACCTGAGGAGGCTCTCTTCTTCTTCGTAAACAACTCCCTTCCCCCATCcagttctcctctctctgctgtctatgagGAGCACCATGAAGAGGACCTGTTCCTATACATGACCTACAGTAACGAGAGCGTCTACGGTGCCTGAGTCGGGACaaaaggaggaaagagagagagagacaggagatggGAGAGAACTCTTTGTAATGTTTCATCCCTATTATTCTTTAAGTATTTAGGAAATGGCGGTGGGGAGATGGCGGTGGGGAGGAGATGGCGGTGGGGAGGAGATGGCGGTGGGGAGGAGAGTTTGGTGGGTTTTGTCGGTATTTTTGGGGTGATTATATTCTGTGTCAGTATGCTCTCAACCATGGTAAGGCATTCTAAATTTGAAAAATAACGGGGTAATTGGAAATAGGGGGagtgaaaaatatatttcaataaAAGAAGAGTGTTAAGGGGAAAGCTCTTTTaatttctatttttctttctcaGCCAGCCATCTGTATTTAAGGcaaatagtattttttttgtgtaaattAATATCATGGACTTTTGTGGAAAATAAAATCCGAAATGCATGGTT
>TU139615
tggGGCAAGAAGTAGCTAGCTGGTTAGAACAGTCGGCTATTTAAGAATATATTTCGTTTAAATAATTTCATCCAAAATAACTGTTCGTCGTGCTCATTATATGATAGCGTTGGTTACGTGAAGAGTCGGTGGGAAAGATCGGTGTGGAATTTTCacttgtatttgtttttattacGTTTTTCCAAAGAAGatggACAGTCAGTACCAGCGCTCTGTACCACTGGAAGTGAGGAGGGCAGAGGGTGAGAGGGTGCGAGCCAAGCATCCCGACAAGATACCAATCATTGTGGAGAGGGCTACCAGGTCGAGAGCTCCTGACCTGGACAAGAAGAAGTACCTTGTGCCCTCTGACCTCACAGtGGGTCAACTGTGCTTCCTGATCCGACAACGTGTGTCTATGAGACCTGAGGAGGCTCTCTTCTTCTTCGTAAACAACTCCCTTCCCCCATCcagttctcctctctctgctgtctatgagGAGCACCATGAAGAGGACCTGTTCCTATACATGACCTACAGTAACGAGAGCGTCTACGGTGCCTGAGTCGGGACaaaaggaggaaagagagagagagacaggagatggGAGAGAACTCTTTGTAATGTTTCATCCCTATTATTCTTTAAGTATTTAGGAAATGGCGGTGGGGAGATGGCGGTGGGGAGGAGATGGCGGTGGGTTTTGTCGGTATTTTTGGGGTGATTATATTCTGTGTCAGTATGCTCTCAACCATGGTAAGGCATTCTAAATTTGAAAAATAACGGGGTAATTGGAAATAGGGGGagtgaaaaatatatttcaataaAAGAAGAGTGTTAAGGGGAAAGCTCTTTTaatttctatttttctttctcaGCCAGCCATCTGTATTTAAGGcaaatagtattttttttgtgtaaattAATATCATGG

Function

NR:

description
Gamma-aminobutyric acid receptor-associated protein-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623198.2 False 1055 mRNA 0.44 5 19924063 19928533
TU139615 True 913 TUCP 0.33 6 19924098 19928460

Neighbor

gene id symbol gene type direction distance location
LOC110537264 LOC106605836 coding downstream 141 19914455 ~ 19923922 (-)
LOC110537231 LOC106605844 coding downstream 150973 19762781 ~ 19773090 (-)
il11 il-11 coding downstream 201538 19715574 ~ 19722525 (-)
LOC110534366 LOC106605829 coding downstream 208860 19706293 ~ 19715203 (-)
LOC110537161 nat14 coding downstream 217899 19703165 ~ 19706164 (-)
LOC110534373 LOC106605835 coding upstream 1001 19929534 ~ 19943377 (-)
LOC110534384 LOC106605832 coding upstream 47447 19975980 ~ 19987280 (-)
gstk1 gstk1 coding upstream 58869 19987402 ~ 19997221 (-)
LOC110537306 LOC106605737 coding upstream 72594 20001127 ~ 20006843 (-)
LOC110537330 fam131b coding upstream 165888 20094421 ~ 20131881 (-)
G120925 NA non-coding downstream 31412 19891200 ~ 19892651 (-)
G120916 NA non-coding downstream 42148 19880288 ~ 19881915 (-)
G120863 NA non-coding downstream 94540 19826932 ~ 19829523 (-)
G120872 NA non-coding downstream 136588 19787267 ~ 19787475 (-)
G120871 NA non-coding downstream 137203 19786639 ~ 19786860 (-)
G120953 NA non-coding upstream 25016 19953549 ~ 19953780 (-)
G120997 NA non-coding upstream 124121 20052654 ~ 20053172 (-)
G121005 NA non-coding upstream 141070 20069603 ~ 20076245 (-)
G121030 NA non-coding upstream 192940 20121473 ~ 20126339 (-)
G121036 NA non-coding upstream 204889 20133422 ~ 20133686 (-)
LOC118944062 LOC106575151 other downstream 228499 19692971 ~ 19695564 (-)
cacng6b LOC106606119 other downstream 435831 19484328 ~ 19499142 (-)
G119663 NA other downstream 875033 19048307 ~ 19049030 (-)
G119512 LOC105019016 other downstream 1122676 18799500 ~ 18801387 (-)
LOC110534340 LOC106605761 other downstream 1277400 18627912 ~ 18646884 (-)
G121046 NA other upstream 282535 20211068 ~ 20212367 (-)
LOC110509624 ret1 other upstream 534149 20462682 ~ 20465854 (-)
G121188 NA other upstream 570363 20498896 ~ 20500587 (-)
G121208 NA other upstream 698024 20626557 ~ 20627700 (-)
G121421 LOC106576258 other upstream 1128065 21056598 ~ 21058849 (-)

Expression


Co-expression Network