Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534373 |
| gene name | LOC106605835 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 19929534 ~ 19943377 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trichohyalin-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036941106.1 | False | 6555 | mRNA | 0.52 | 15 | 19929534 | 19943375 |
| XM_036941098.1 | True | 7343 | mRNA | 0.51 | 15 | 19929534 | 19943377 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537275 | grl1 | coding | downstream | 1001 | 19924063 ~ 19928533 (-) |
| LOC110537264 | LOC106605836 | coding | downstream | 5612 | 19914455 ~ 19923922 (-) |
| LOC110537231 | LOC106605844 | coding | downstream | 156444 | 19762781 ~ 19773090 (-) |
| il11 | il-11 | coding | downstream | 207009 | 19715574 ~ 19722525 (-) |
| LOC110534366 | LOC106605829 | coding | downstream | 214331 | 19706293 ~ 19715203 (-) |
| LOC110534384 | LOC106605832 | coding | upstream | 32603 | 19975980 ~ 19987280 (-) |
| gstk1 | gstk1 | coding | upstream | 44025 | 19987402 ~ 19997221 (-) |
| LOC110537306 | LOC106605737 | coding | upstream | 57750 | 20001127 ~ 20006843 (-) |
| LOC110537330 | fam131b | coding | upstream | 151044 | 20094421 ~ 20131881 (-) |
| LOC110509570 | LOC106575203 | coding | upstream | 369249 | 20312626 ~ 20318150 (-) |
| G120925 | NA | non-coding | downstream | 36883 | 19891200 ~ 19892651 (-) |
| G120916 | NA | non-coding | downstream | 47619 | 19880288 ~ 19881915 (-) |
| G120863 | NA | non-coding | downstream | 100011 | 19826932 ~ 19829523 (-) |
| G120872 | NA | non-coding | downstream | 142059 | 19787267 ~ 19787475 (-) |
| G120871 | NA | non-coding | downstream | 142674 | 19786639 ~ 19786860 (-) |
| G120953 | NA | non-coding | upstream | 10172 | 19953549 ~ 19953780 (-) |
| G120997 | NA | non-coding | upstream | 109277 | 20052654 ~ 20053172 (-) |
| G121005 | NA | non-coding | upstream | 126226 | 20069603 ~ 20076245 (-) |
| G121030 | NA | non-coding | upstream | 178096 | 20121473 ~ 20126339 (-) |
| G121036 | NA | non-coding | upstream | 190045 | 20133422 ~ 20133686 (-) |
| LOC118944062 | LOC106575151 | other | downstream | 233970 | 19692971 ~ 19695564 (-) |
| cacng6b | LOC106606119 | other | downstream | 441302 | 19484328 ~ 19499142 (-) |
| G119663 | NA | other | downstream | 880504 | 19048307 ~ 19049030 (-) |
| G119512 | LOC105019016 | other | downstream | 1128147 | 18799500 ~ 18801387 (-) |
| G121046 | NA | other | upstream | 267691 | 20211068 ~ 20212367 (-) |
| LOC110509624 | ret1 | other | upstream | 519305 | 20462682 ~ 20465854 (-) |
| G121188 | NA | other | upstream | 555519 | 20498896 ~ 20500587 (-) |
| G121208 | NA | other | upstream | 683180 | 20626557 ~ 20627700 (-) |
| G121421 | LOC106576258 | other | upstream | 1113221 | 21056598 ~ 21058849 (-) |
