Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944180 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20205740 ~ 20206032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039493.1 | True | 293 | mRNA | 0.52 | 1 | 20205740 | 20206032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944182 | NA | coding | upstream | 610 | 20204830 ~ 20205130 (+) |
| LOC118944183 | NA | coding | upstream | 2529 | 20202903 ~ 20203211 (+) |
| LOC110537365 | LOC106605735 | coding | upstream | 4708 | 20197023 ~ 20201032 (+) |
| nop2 | LOC106576663 | coding | upstream | 8882 | 20190285 ~ 20196858 (+) |
| LOC110537348 | LOC106575899 | coding | upstream | 20490 | 20179254 ~ 20185414 (+) |
| LOC118944184 | NA | coding | downstream | 2831 | 20208863 ~ 20209151 (+) |
| cnp-1-2 | cnp-1-2 | coding | downstream | 21589 | 20227621 ~ 20232215 (+) |
| LOC100329212 | LOC100135813 | coding | downstream | 37398 | 20243430 ~ 20249298 (+) |
| opn9 | LOC106576962 | coding | downstream | 44257 | 20250289 ~ 20259650 (+) |
| LOC110537377 | LOC106576644 | coding | downstream | 53783 | 20259815 ~ 20297138 (+) |
| G120213 | NA | non-coding | upstream | 31253 | 20173740 ~ 20174487 (+) |
| G120212 | NA | non-coding | upstream | 33295 | 20172049 ~ 20172445 (+) |
| G120210 | NA | non-coding | upstream | 34984 | 20170545 ~ 20170756 (+) |
| G120209 | NA | non-coding | upstream | 35622 | 20169800 ~ 20170118 (+) |
| G120184 | NA | non-coding | downstream | 5424 | 20211456 ~ 20212371 (+) |
| LOC110534400 | ncapd2 | non-coding | downstream | 10186 | 20202143 ~ 20228607 (+) |
| G120238 | NA | non-coding | downstream | 62466 | 20268498 ~ 20270723 (+) |
| G120254 | NA | non-coding | downstream | 106368 | 20312400 ~ 20312765 (+) |
| G120188 | NA | non-coding | downstream | 119070 | 20325102 ~ 20326230 (+) |
| G120211 | NA | other | upstream | 34359 | 20171082 ~ 20171381 (+) |
| zyx | zyx | other | upstream | 48630 | 20145710 ~ 20165887 (+) |
| casp2 | LOC106605831 | other | upstream | 180757 | 20018602 ~ 20030933 (+) |
| G120059 | grl1 | other | upstream | 277263 | 19924072 ~ 19928477 (+) |
| G120259 | NA | other | downstream | 113707 | 20319739 ~ 20320256 (+) |
| G120169 | NA | other | downstream | 201830 | 20407862 ~ 20419128 (+) |
| erfl3 | LOC106576393 | other | downstream | 694242 | 20900204 ~ 20977481 (+) |
| LOC110509768 | LOC106576258 | other | downstream | 785722 | 20990131 ~ 21058856 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 1336065 | 21532987 ~ 21547038 (+) |
