Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944184 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20208863 ~ 20209151 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039497.1 | True | 289 | mRNA | 0.52 | 1 | 20208863 | 20209151 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944180 | NA | coding | upstream | 2831 | 20205740 ~ 20206032 (+) |
| LOC118944182 | NA | coding | upstream | 3733 | 20204830 ~ 20205130 (+) |
| LOC118944183 | NA | coding | upstream | 5652 | 20202903 ~ 20203211 (+) |
| LOC110537365 | LOC106605735 | coding | upstream | 7831 | 20197023 ~ 20201032 (+) |
| nop2 | LOC106576663 | coding | upstream | 12005 | 20190285 ~ 20196858 (+) |
| cnp-1-2 | cnp-1-2 | coding | downstream | 18470 | 20227621 ~ 20232215 (+) |
| LOC100329212 | LOC100135813 | coding | downstream | 34279 | 20243430 ~ 20249298 (+) |
| opn9 | LOC106576962 | coding | downstream | 41138 | 20250289 ~ 20259650 (+) |
| LOC110537377 | LOC106576644 | coding | downstream | 50664 | 20259815 ~ 20297138 (+) |
| LOC110509548 | LOC106575195 | coding | downstream | 89335 | 20298486 ~ 20310775 (+) |
| LOC110537348 | LOC106575899 | non-coding | upstream | 23449 | 20179254 ~ 20185414 (+) |
| G120213 | NA | non-coding | upstream | 34376 | 20173740 ~ 20174487 (+) |
| G120212 | NA | non-coding | upstream | 36418 | 20172049 ~ 20172445 (+) |
| G120210 | NA | non-coding | upstream | 38107 | 20170545 ~ 20170756 (+) |
| G120209 | NA | non-coding | upstream | 38745 | 20169800 ~ 20170118 (+) |
| G120184 | NA | non-coding | downstream | 2305 | 20211456 ~ 20212371 (+) |
| LOC110534400 | ncapd2 | non-coding | downstream | 7067 | 20202143 ~ 20228607 (+) |
| G120238 | NA | non-coding | downstream | 59347 | 20268498 ~ 20270723 (+) |
| G120254 | NA | non-coding | downstream | 103249 | 20312400 ~ 20312765 (+) |
| G120188 | NA | non-coding | downstream | 115951 | 20325102 ~ 20326230 (+) |
| G120211 | NA | other | upstream | 37482 | 20171082 ~ 20171381 (+) |
| zyx | zyx | other | upstream | 51753 | 20145710 ~ 20165887 (+) |
| casp2 | LOC106605831 | other | upstream | 183880 | 20018602 ~ 20030933 (+) |
| G120059 | grl1 | other | upstream | 280386 | 19924072 ~ 19928477 (+) |
| G120259 | NA | other | downstream | 110588 | 20319739 ~ 20320256 (+) |
| G120169 | NA | other | downstream | 198711 | 20407862 ~ 20419128 (+) |
| erfl3 | LOC106576393 | other | downstream | 691123 | 20900204 ~ 20977481 (+) |
| LOC110509768 | LOC106576258 | other | downstream | 782603 | 20990131 ~ 21058856 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 1332946 | 21532987 ~ 21547038 (+) |
