LOC118936525 (LOC106605721)


Basic Information

Item Value
gene id LOC118936525
gene name LOC106605721
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20413499 ~ 20420924 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941300.1
TCATCTGCACGTTTCGGTTGTCTTTAATCTGGTTTCCGCCACTCTGTCAATCTACTTAGTTTGTCGATATCTTTCTGGGCCAAGTCAAACAGAGACGTTTTTTAACATGACTTTTAGACTCTTTAGTCAAACTCCCCACTAAAACAAACAGTCAGCTACAGTACCTGGAAGGCTGAGAGGCTGTGAAATACAGAGCGAGGTCTTCAGGTCTTACACAGCAGGTTCATTCACCATAGTCTCTCCTGTCCAATCACAGTCATGGACTGGGTCTATTCAACACTCTGGCtgctgggtgtgtctgtgtgtgagttttGGGTTCCAGTCTCTTCTGCAGTGATTGGCTGTGGGGAACCTGAACCGTTGCCGAATGGAAGGGTGACGTTCATATCTGGCTCTCAGAACCAGCACCTCTCAGTCATTCAGTACCAATGCAATGAGCAGTTCTACAGTCTTCCTGAAGGACATAATGGAAACTTCACATGTTCATCAGACGGAAAGTGGAAAGACCACCTGAACAGCTCACTGATTCCTCAATGTATCCCAGTGTGTGGTTGTCCTACAGTGAAACTTTCAGGATTTGGAAGGATTTTGGGGGGAGAGCCAGCTCCAGCTGGATCCTTCCCCTGGCAGGTGTTGTTGACAGGtaatggtagaggaggagggatagtTATCGGGGACCGCTGGATCATGACTGCAGCACATGTCCTAGATCGATATCACTGGGAGTTTCCTAAGGTATATGTTGGACACAACAATGTGGATGAGCTCATCCAGTCTCCACCTCTTGAGGTCGCCTCTCTCCATATTCACCCTGAATACAACAATATAGGTGATGTAAACTACGACCATGACATCGCCCTGATCCATCtcaaacatccaatcacattcaaTGCTCATATCATGCCACTGTGTCTGCCAGCAAAGGACGCTAAATATCCGACTGGGCGGAATGGCTTAATTTCAGGATTTGGCAACAAAGAGCGTGATATGGCTACCAATAACCTCATGTATGTTCCTCTACCTGTGGTGAACCAGACAATCTGTAGGAAATCTATTGAGAAGGTGAAAAATGAAAGAAATCTCAGTCTAACAGACAACATGCTCTGTGCTGGGAATTCTGAGGGAGGCAAGGACTCCTGTACGGGAGACAGTGGAGGAGCGTACATCCTGAAGGAGGGTGATTATTTCTGGGCAGCAGGGATCGTCAGCTGGGGGATTAACTGTGGAGAGCCTGGACAATATGGGGTCTACACCCGTGTGGCTAACTACGTAGACTGGATCAAGAAGACCATAGAGGAGGAAGAGCAAAAAACAATCTGTGGAAGACCTATGGTGTCCATAGAAATACACCAAAGGATTCTGGGAGGAGAGGTAGCTCCAAAAGGAACATTTCCCTGGCAGATGCTTCTCAGTGTGGAAGGAGGCCGATCAGGAGGGATGGTCATCGGGGACAGGTGGATCCTGACTGCTGCTCATGGCCTGGTGCATCAACATAACAACCAAGTCATCAAGAAGAGTGAAGTTATGGCATACGTTGGCGACAACAATGTGGAAAACCTCCTTCAGTCTCCACCTCTTGAAGTggcctctctccatcctcacccTGGGTACAGTAACACAGACGGTTTATCCTTCAACCACGACATTGCCTTGATCAAGCTTCAACACCCACTCACATTCAGTAGTTCCATCATGCAAGTGTGTCTGCCTGCAAAGGGCGCTGAATACTCCACTGGAAGAGTTGGctggGTTTCAGGGTTTGGCCTCAAAGATGATGATGAAAAGCCCAGTAACCTCAGATATGTCCGGATTCCCCTGGTGGACCAGGCGAAGTGCAGAAGCTCTATTGATGAGgtgaggaagaagaagagagaagccCCTGATTTGACAGACGGCATGTTCTGTGCCGGGTTACCAGAGGGTGGAAAGGACACCTGTGCAGGGGATGGTGGAGGGCCGTATGTCCTGAAGTATGGGGGTGTTTTCTGGGCAGCAGGGATCGCCAGCTGGGGAATTGACTGTGGAGAACCAGGCCAATATGGGGTCTACACCCGTGTAGCTAACTATGTAGAATGGATCAAGAAGACTATGGAGGAGAATCGAAATTAGGGCTGTATAAATTATGCAAGAAATGTTTGAGTTTGTCGAGGATAGCAGCAAAtatacaatataaacacaatatatgtttttttattgAATTAAGGGTTTTCTGTAACTGGAGCATATTAAATACATGTTAAGTCTG
>XM_036941302.1
TCTCATCTGCACGTTTCGGTTGTCTTTAATCTGGTTTCCGCCACTCTGTCAATCTACTTAGTTTGTCGATATCTTTCTGGGCCAAGTCAAACAGAGACGTTTTTTAACATGACTTTTAGACTCTTTAGTCAAACTCCCCACTAAAACAAACAGTCAGCTACAGTACCTGGAAGGCTGAGAGGCTGTGAAATACAGAGCGAGGTCTTCAGGTCTTACACAGCAGGTTCATTCACCATAGTCTCTCCTGTCCAATCACAGTCATGGACTGGGTCTATTCAACACTCTGGCtgctgggtgtgtctgtgtgtgagttttGGGTTCCAGTCTCTTCTGCAGTGATTGGCTGTGGGGAACCTGAACCGTTGCCGAATGGAAGGGTGACGTTCATATCTGGCTCTCAGAACCAGCACCTCTCAGTCATTCAGTACCAATGCAATGAGCAGTTCTACAGTCTTCCTGAAGGACATAATGGAAACTTCACATGTTCATCAGACGGAAAGTGGAAAGACCACCTGAACAGCTCACTGATTCCTCAATGTATCCCAGTGTGTGGTTGTCCTACAGTGAAACTTTCAGGATTTGGAAGGATTTTGGGGGGAGAGCCAGCTCCAGCTGGATCCTTCCCCTGGCAGGTGTTGTTGACAGGtaatggtagaggaggagggatagtTATCGGGGACCGCTGGATCATGACTGCAGCACATGTCCTAGATCGATATCACTGGGAGTTTCCTAAGGTATATGTTGGACACAACAATGTGGATGAGCTCATCCAGTCTCCACCTCTTGAGGTCGCCTCTCTCCATATTCACCCTGAATACAACAATATAGGTGATGTAAACTACGACCATGACATCGCCCTGATCCATCtcaaacatccaatcacattcaaTGCTCATATCATGCCACTGTGTCTGCCAGCAAAGGACGCTAAATATCCGACTGGGCGGAATGGCTTAATTTCAGGATTTGGCAACAAAGAGCGTGATATGGCTACCAATAACCTCATGTATGTTCCTCTACCTGTGGTGAACCAGACAATCTGTAGGAAATCTATTGAGAAGGTGAAAAATGAAAGAAATCTCAGTCTAACAGACAACATGCTCTGTGCTGGGAATTCTGAGGGAGGCAAGGACTCCTGTACGGGAGACAGTGGAGGAGCGTACATCCTGAAGGAGGGTGATTATTTCTGGGCAGCAGGGATCGTCAGCTGGGGGATTAACTGTGGAGAGCCTGGACAATATGGGGTCTACACCCGTGTGGCTAACTACGTAGACTGGATCAAGAAGACCATAGAGGAGGAAGAGCAAAAAACAATCTGTGGAAGACCTATGGTGTCCATAGAAATACACCAAAGGATTCTGGGAGGAGAGGTAGCTCCAAAAGGAACATTTCCCTGGCAGATGCTTCTCAGTGTGGAAGGAGGCCGATCAGGAGGGATGGTCATCGGGGACAGGTGGATCCTGACTGCTGCTCATGGCCTGGTGCATCAACATAACAACCAAGTCATCAAGAAGAGTGAAGTTATGGCATACGTTGGCGACAACAATGTGGAAAACCTCCTTCAGTCTCCACCTCTTGAAGTggcctctctccatcctcacccTGGGTACAGTAACACAGACGGTTTATCCTTCAACCACGACATTGCCTTGATCAAGCTTCAACACCCACTCACATTCAGTAGTTCCATCATGCAAGTGTGTCTGCCTGCAAAGGGCGCTGAATACTCCACTGGAAGAGTTGGctcatcactaagctaaggaccctgggactaaacacctccttctgcaactggatccaggaCTTTCTgatggaccgcccccaggtggtaagtgtaCGTAACAACAAATCCGcaactgatcctcaacacaggggcccctcagggatgcgtgctcagtcccctcctgtgctcctgtgctccca

Function

NR:

description
mannan-binding lectin serine protease 2-like

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941300.1 False 2245 mRNA 0.47 9 20413499 20420922
XM_036941302.1 True 1926 mRNA 0.49 9 20416089 20420924
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110503568 c1r/c1s coding downstream 14006 20391977 ~ 20399493 (-)
tapbpl LOC100136300 coding downstream 36348 20372105 ~ 20377151 (-)
lag-3 lag-3 coding downstream 56501 20354114 ~ 20356998 (-)
LOC110509570 LOC106575203 coding downstream 95349 20312626 ~ 20318150 (-)
LOC110537330 fam131b coding downstream 281618 20094421 ~ 20131881 (-)
LOC110503575 LOC106605669 coding upstream 17871 20438795 ~ 20452556 (-)
LOC110509624 ret1 coding upstream 41765 20462682 ~ 20465854 (-)
LOC110509434 NA coding upstream 45057 20465981 ~ 20504869 (-)
LOC110537414 LOC106576265 coding upstream 85299 20506223 ~ 20582957 (-)
LOC110537423 LOC105029961 coding upstream 176132 20597056 ~ 20602488 (-)
G121160 LOC100194563 non-coding downstream 49316 20362223 ~ 20364183 (-)
G121153 NA non-coding downstream 68769 20344495 ~ 20344730 (-)
G121152 NA non-coding downstream 93236 20319739 ~ 20320263 (-)
G121093 NA non-coding downstream 189813 20222336 ~ 20223686 (-)
G121167 NA non-coding upstream 7679 20428603 ~ 20434075 (-)
G121168 NA non-coding upstream 7932 20428856 ~ 20434379 (-)
G121174 NA non-coding upstream 46228 20467152 ~ 20468133 (-)
G121175 NA non-coding upstream 48087 20469011 ~ 20470007 (-)
G121176 NA non-coding upstream 49184 20470108 ~ 20471953 (-)
G121046 NA other downstream 201132 20211068 ~ 20212367 (-)
LOC110537275 grl1 other downstream 485039 19924063 ~ 19928533 (-)
LOC118944062 LOC106575151 other downstream 717935 19692971 ~ 19695564 (-)
cacng6b LOC106606119 other downstream 925267 19484328 ~ 19499142 (-)
G119663 NA other downstream 1364469 19048307 ~ 19049030 (-)
G121188 NA other upstream 77972 20498896 ~ 20500587 (-)
G121208 NA other upstream 205633 20626557 ~ 20627700 (-)
G121421 LOC106576258 other upstream 635674 21056598 ~ 21058849 (-)
G121533 LOC106583873 other upstream 867692 21288616 ~ 21346687 (-)

Expression

LOC118936525(LOC106605721) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 60.
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LOC118936525(LOC106605721) Expression in each Bioproject

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LOC118936525(LOC106605721) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
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Co-expression Network