LOC110537439 (LOC106576545)


Basic Information

Item Value
gene id LOC110537439
gene name LOC106576545
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20615636 ~ 20628482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941413.1
tcactctccttctctctcatttgCTCACATTCTCTCACTTTCCCTACCAGGCTTCACACACACTGCAGGATGTCGATAGTGATCATTGTTGCCAGGGAGATCCTGGATTCCAGGGGGAACCCCACAGTGGAAGTGGACCTGCACACTGACAAAGGTGTCTTCAGGGCAGCTGTGCCTAGCGGAGCGTCTACTGGCATCTATGAAGCCCTGGAGCTGAGAGACGGAGACAAAAGCCGCTACAAGGGCAAAGGTGTGCTCAAGGCTGTTGGTCACATCAATGACACCATCGGTCCTGCCCTCATCCAGTCGGGGGTCAGTGTGGTAGAACAGGAGAAACTGGACAAGATGATGATAGAGATGGACGGCACTGAGAACAAGTCTCAGTTTGGGGCCAATGCTATTCTGGGTGTGTCCTTGGCCATATGCAAAGCTGGTGCTGCAGAGAAAGGTGTCCCCCTGTACCGTCACATTGCTGACCTGGCAGGAAACACAGAGCTAGTGCTTCCAGTTCCTGCATTTAACGTCATCAACGGGGGCTCTCATGCGGGCAACAAGCTGGCCATGCAGGAGTTCATGGTACTTCCTGTAGGGGCGGAGTCTTTCAGGGACGCTGTGCGTGTGGGGGCGGAGCTGTACCAGACGCTGAGGGAAGTGATCAAGGAGAAGTATGGCCAGAACGCCACCAACGTGGGGGACGAGGGGGGGTTCGCCCCAAACATACTGGAGAACACTGAagCCCTGGAGCTCATCAAGACAGCCATCGAGAAGGCAGGTTTCACAGACAAGGTGGTGATCGGGATGGACGTGGCAGCCTCTGAGTTCTACAAAGAGGGCAAGTACGACCTGGACTTCAAGTCTCCGCCCAACGCAGACCGCCACATCAGCGCCCAAGAGCTCTGCGACATGTACCAGGGCTTTGTCAATGACTAcccagtggTGTCCATTGAGGATCCGTTTGACCAGGATGACTGGCCGGCCTGGTCCCAGATGACAGCCTCCGTGGGTATCCAGGTGGTGGGGGACGACCTGACCGTCACCAACCCCAAGAGGATAGAGCGCGCCCTGGAGGAGAGGGCCTGCAACTGCCTGCTGCTCAAAGTCAACCAGATCGGCTCTGTCACCGAAGCCATTCAGGCgtgTAAGTTGGCTCAGGAGAATGGCTGGGGGGTGATGGTGAGCCACCGCTCAGGTGAGACAGAGGACACCTTCATTGCTGATCTGGTGGTGGGCCTCTGCACTGGACAAATCAAGACTGGAGCTCCCTGTCGATCAGAGCGGCTGGCCAAATACAATCAACTCATGAGGATTGAGGAGGAGTTAGGGGACCAGGCTCGCTTCGCAGGGCACAACTTCCGGAACCCCGCCGCCCTCTAAGACCCCTCTGGGctgacagacactgacacagAATCACAGACATACATCACATCACTGcagggcacagacagacagactgacatagatggacagacacagatgtacacagacagatatacataAATACCTTCAATGaatccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagaaggtCGGACAGACATATGGTTGGAAGGAtaaagagacagactgacagacagagtgCGAGCAGACCAATAATCAATTACCGATTACCCCCTTAAAAAGTaaagcagagacagacagacagacagatgcactGAGAAACACATTCATATGAATTAGCCTTTATATCACTGAAAACACACTGATGTATTGGAGGTTATATGTTTCATCAGATGATGAGTTGGAGGCTGGTGCAGAATGCAGACGGACTGATTGGTTTTAAACAAGACATGAGTGTGTTGCACAaagcagtgtttctctctcaaaACATACATGCACATTCCTCTACCTGTTCCCTCTTcttttccatccctctcttttctcctcccctTTACTTCAAAGCGTTTTCCCATCTCAGTTTCCTCAATTGCCCAACCCtttcccctttcctcccctcccctccttccaccTTTCAGTTACCACTTACATCTAAAAGCCTGCAACATAATTGTATGTTACCACTTACATCTAAAAGCTTACCACAGAAACCATCCAATCAATAAAGATATGAACACTTATGATGTAAACATCAGC
>XM_036941418.1
agtctcctctcctctgtctctctgctctcttctctcgtCATTTCATCCCTCAGCCAGCTCAAATCCTCTGATTAGTCCTTGactgcacagcacagcacagcacagGATGTCGATAGTGATCATTGTTGCCAGGGAGATCCTGGATTCCAGGGGGAACCCCACAGTGGAAGTGGACCTGCACACTGACAAAGGTGTCTTCAGGGCAGCTGTGCCTAGCGGAGCGTCTACTGGCATCTATGAAGCCCTGGAGCTGAGAGACGGAGACAAAAGCCGCTACAAGGGCAAAGGTGTGCTCAAGGCTGTTGGTCACATCAATGACACCATCGGTCCTGCCCTCATCCAGTCGGGGGTCAGTGTGGTAGAACAGGAGAAACTGGACAAGATGATGATAGAGATGGACGGCACTGAGAACAAGTCTCAGTTTGGGGCCAATGCTATTCTGGGTGTGTCCTTGGCCATATGCAAAGCTGGTGCTGCAGAGAAAGGTGTCCCCCTGTACCGTCACATTGCTGACCTGGCAGGAAACACAGAGCTAGTGCTTCCAGTTCCTGCATTTAACGTCATCAACGGGGGCTCTCATGCGGGCAACAAGCTGGCCATGCAGGAGTTCATGGTACTTCCTGTAGGGGCGGAGTCTTTCAGGGACGCTGTGCGTGTGGGGGCGGAGCTGTACCAGACGCTGAGGGAAGTGATCAAGGAGAAGTATGGCCAGAACGCCACCAACGTGGGGGACGAGGGGGGGTTCGCCCCAAACATACTGGAGAACACTGAagCCCTGGAGCTCATCAAGACAGCCATCGAGAAGGCAGGTTTCACAGACAAGGTGGTGATCGGGATGGACGTGGCAGCCTCTGAGTTCTACAAAGAGGGCAAGTACGACCTGGACTTCAAGTCTCCGCCCAACGCAGACCGCCACATCAGCGCCCAAGAGCTCTGCGACATGTACCAGGGCTTTGTCAATGACTAcccagtggTGTCCATTGAGGATCCGTTTGACCAGGATGACTGGCCGGCCTGGTCCCAGATGACAGCCTCCGTGGGTATCCAGGTGGTGGGGGACGACCTGACCGTCACCAACCCCAAGAGGATAGAGCGCGCCCTGGAGGAGAGGGCCTGCAACTGCCTGCTGCTCAAAGTCAACCAGATCGGCTCTGTCACCGAAGCCATTCAGGCgtgTAAGTTGGCTCAGGAGAATGGCTGGGGGGTGATGGTGAGCCACCGCTCAGGTGAGACAGAGGACACCTTCATTGCTGATCTGGTGGTGGGCCTCTGCACTGGACAAATCAAGACTGGAGCTCCCTGTCGATCAGAGCGGCTGGCCAAATACAATCAACTCATGAGGATTGAGGAGGAGTTAGGGGACCAGGCTCGCTTCGCAGGGCACAACTTCCGGAACCCCGCCGCCCTCTAAGACCCCTCTGGGctgacagacactgacacagAATCACAGACATACATCACATCACTGcagggcacagacagacagactgacatagatggacagacacagatgtacacagacagatatacataAATACCTTCAATGaatccgacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagaaggtCGGACAGACATATGGTTGGAAGGAtaaagagacagactgacagacagagtgCGAGCAGACCAATAATCAATTACCGATTACCCCCTTAAAAAGTaaagcagagacagacagacagacagatgcactGAGAAACACATTCATATGAATTAGCCTTTATATCACTGAAAACACACTGATGTATTGGAGGTTATATGTTTCATCAGATGATGAGTTGGAGGCTGGTGCAGAATGCAGACGGACTGATTGGTTTTAAACAAGACATGAGTGTGTTGCACAaagcagtgtttctctctcaaaACATACATGCACATTCCTCTACCTGTTCCCTCTTcttttccatccctctcttttctcctcccctTTACTTCAAAGCGTTTTCCCATCTCAGTTTCCTCAATTGCCCAACCCtttcccctttcctcccctcccctccttccaccTTTCAGTTACCACTTACATCTAAAAGCCTGCAACATAATTGTATGTTACCACTTACATCTAAAAGCTTACCACAGAAACCATCCAATCAATAAAGATATGAACACTTATGATGTAAACATCAGC

Function

NR:

description
PREDICTED: gamma-enolase-like

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0000015 phosphopyruvate hydratase complex cellular_component
GO:0004634 phosphopyruvate hydratase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01689 ENO, eno; enolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941413.1 False 2372 mRNA 0.51 11 20615636 20628482
XM_036941418.1 True 2409 mRNA 0.51 11 20615753 20628482

Neighbor

gene id symbol gene type direction distance location
LOC110537428 mlf2 coding upstream 3156 20608551 ~ 20612480 (+)
wnt4b wnt4b coding upstream 19788 20585309 ~ 20596873 (+)
LOC110509563 LOC106576603 coding upstream 153629 20452782 ~ 20462007 (+)
LOC110509646 NA coding upstream 243613 20364572 ~ 20372023 (+)
LOC110509663 LOC100194563 coding upstream 251424 20362226 ~ 20364212 (+)
LOC110537453 atn1 coding downstream 644 20629126 ~ 20649273 (+)
LOC110537492 LOC106605858 coding downstream 51359 20679841 ~ 20695430 (+)
pou2f2a pou2f2 coding downstream 112569 20741051 ~ 20885076 (+)
erfl3 LOC106576393 coding downstream 271722 20900204 ~ 20977481 (+)
LOC110509768 LOC106576258 coding downstream 361649 20990131 ~ 21058856 (+)
G120346 NA non-coding upstream 32666 20582204 ~ 20582970 (+)
G120342 NA non-coding upstream 35875 20579295 ~ 20579761 (+)
G120317 NA non-coding upstream 73524 20536603 ~ 20542112 (+)
G120318 NA non-coding upstream 75334 20538714 ~ 20540302 (+)
G120402 NA non-coding downstream 107258 20735740 ~ 20736339 (+)
G120418 NA non-coding downstream 130876 20759358 ~ 20759746 (+)
G120425 NA non-coding downstream 162763 20791245 ~ 20796296 (+)
G120450 NA non-coding downstream 203017 20831499 ~ 20838492 (+)
G120169 NA other upstream 196508 20407862 ~ 20419128 (+)
G120259 NA other upstream 295380 20319739 ~ 20320256 (+)
LOC110537348 LOC106575899 other upstream 431011 20179254 ~ 20185414 (+)
G120211 NA other upstream 444255 20171082 ~ 20171381 (+)
zyx zyx other upstream 458526 20145710 ~ 20165887 (+)
LOC118938333 LOC106605563 other downstream 913615 21532987 ~ 21547038 (+)
G121677 NA other downstream 956939 21585421 ~ 21586101 (+)
LOC110537735 LOC106595974 other downstream 1192732 21821165 ~ 21825285 (+)

Expression


Co-expression Network