LOC110537468 (LOC106605860)


Basic Information

Item Value
gene id LOC110537468
gene name LOC106605860
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20662992 ~ 20665219 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021623535.2
CGCGACGACCTGTGCCTGCCGCTCCAGTAGGGGGCGACAATGCAAAATGTATTATACCGTACACGCACAAAGACTGACAGCGCTCTTTGTCTTGTTTACTTTGTTTACGTTGGTAGCTCGCTGGCTAACTTGGCTAGCAAGACAGATTTTCTTCTCAAAAATGTCTACAATGGAGTACTTGAGAGTGTTTCTCAACCAGAAATTAATAGCGGCAGCTGAAGAGATATTTGGTGTCGTTGAAGAAACGATAGCAGAGTACCAGGAAGAGGTTTCTCACACAAAGGAGGAGAACAGGCGTCTACGGAGCATGCTGGATATTCGTTCTAAGCCACAGATCAAGTTACACAGACGGGCAGACCCCCAGCAGCTCACTGTCACCGTGTCTGATGAGCAGCAGGAGTGGAGTCCCAGTCTGGGGCAGAAGGACCCAGAACCCACACGGATGAAAGATGAACAGAATGAACCAAGGACCAGTCAGGAGGATGAGAATCATTTCAATGAGTTTATCAATTCTTACGGCTGTGTATCAAGTGACTATTATCAGGACCCAACTCAGCCCTCACATGGAGAGAGATACTCTCTACCCAGCACCTCAACTGAACAGATCAAAACAGAACCTTATGTAGAAGACTATGGTGTATCAGAACCAACCAGAGAGTCTCAGCCCTTTTCTGGAGTAGATAGAGAGTGTTCTGCAGCTCAGAGTGAAAACAGAGGACATATTGACAGGATGGAGTGTGGAGGACCTCTGTCAGGTCTAATGTTAAAGCCTCTCAAATCAAAGAGAACAAAGACAGTAAAAGGACAAAGTTCTCATAGTGTTAAGGACAGGAAATTGAACCATCTAAAATCACACTCGAGACCCAGTGTAAGCTGGGATGCTGCTCCTAGTTGTAAGGTATGTGGAAAGCAATTTGACTCCATGGCGTCTTTATTAAATCATGTGCAAGCGCACACACAGGATAAAGAACATCTTTGTGGTGTGTGTGGAAAATTCTGTCAGTCCACAGAAAGTATGATAGATCACCTACAAACTCACATCGGAGCAAAGTGTTGTCATATTTGTGGTAAATATTTTGCTTGGGATACTTTCCTGAAAAGGCATTTGAGGagtcatacaggggagaagccgtTTCACTGTCATGATTGTGGCAAAGGATTTACTCAGCGTGGACACCTAAACTTACATATGAGGagccacacaggggagaaaccacaTCAATGCCAGGATTGTGGCAAATGTTTCAGCCAGAATACATCTCTGATAGTGCACATGAGgactcacacaggggagaagccatacaTGTGTCCTGTATGTAGAAAATGCTTTACCACATCAAGTATGTTGAAGAAGCATCAGACAGCTCACAAACATATAGGTGTCTTGAACGTGGCCAATGCCACAATGGATTCAGACCATACAGAGCCACGTGAAGAGGGTTTACAAAGAGGAGAACACATGACTGTTCCCTGTGTGGGGGGAGAGAATCAGACAGCAGACTGAGAGACACGTGAGAGGAGAATCAGGACATAGCCCTCCTCAGGACACTGCTCTCTGATTAATATCATGTTCTAACAGAGAGCAGTTAGTGGGTTTCTGAGTAACAGGAGTCCCTGCTCATTAGTTATAGGATGACACAGAGGACATGGTGTGATCCACTGTTCTCTGTCTGTATATACACTTTGCATTGGTCTTTAGAGTAATATGTCTTGTTCATATATGGTAATATGTCACAATACATCTGCCCTGATGTTGCAAACAGCCTAGTATTCAGAATGTTTGTTCCCTTGTGTTTAGTGTGGCAAGATCTTCCATACACCAAATGACATACTTACCTCGGAGCCTAATGCCAAAATGCACCaagggaaaaaatatatatttcatttcATGTGTATTTACATGTATTGAGAATTGGTATGATACAGTTATGCTATGTTCAATGGGAACTAAATATACCACCTGAAATGAGAGCTGCTTCTTTCAACCAACCCAGATATTGTACATTCCCAGACATCCATAAAGTATTACAGAATAAATGGCTGATAATGTGTTCA

Function

NR:

description
zinc finger protein 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021623535.2 True 2055 mRNA 0.44 2 20662992 20665219
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110537462 LOC106576526 coding downstream 2005 20651234 ~ 20660987 (-)
LOC110537423 LOC105029961 coding downstream 60504 20597056 ~ 20602488 (-)
LOC110537414 LOC106576265 coding downstream 80035 20506223 ~ 20582957 (-)
LOC110509434 NA coding downstream 158123 20465981 ~ 20504869 (-)
LOC110509624 ret1 coding downstream 197138 20462682 ~ 20465854 (-)
LOC110537475 LOC106605848 coding upstream 3349 20668568 ~ 20673278 (-)
LOC110537483 LOC106605857 coding upstream 8557 20673776 ~ 20688855 (-)
LOC110509793 LOC106576373 coding upstream 398848 21064067 ~ 21074205 (-)
LOC110537544 LOC106605712 coding upstream 656794 21322013 ~ 21348882 (-)
LOC110534425 LOC106605569 coding upstream 711207 21376426 ~ 21379023 (-)
G121238 NA non-coding downstream 19170 20641755 ~ 20643822 (-)
G121219 NA non-coding downstream 34511 20585748 ~ 20628481 (-)
G121203 NA non-coding downstream 89041 20568600 ~ 20573951 (-)
G121197 NA non-coding downstream 113782 20532867 ~ 20549210 (-)
G121209 NA non-coding upstream 29150 20694369 ~ 20695390 (-)
G121286 NA non-coding upstream 132175 20797394 ~ 20798054 (-)
G121310 NA non-coding upstream 198135 20863354 ~ 20863912 (-)
G121312 NA non-coding upstream 202074 20867293 ~ 20867528 (-)
G121314 NA non-coding upstream 205382 20870601 ~ 20870931 (-)
G121208 NA other downstream 35292 20626557 ~ 20627700 (-)
G121188 NA other downstream 162405 20498896 ~ 20500587 (-)
G121046 NA other downstream 450625 20211068 ~ 20212367 (-)
LOC110537275 grl1 other downstream 734532 19924063 ~ 19928533 (-)
G121421 LOC106576258 other upstream 391379 21056598 ~ 21058849 (-)
G121533 LOC106583873 other upstream 623397 21288616 ~ 21346687 (-)
G121738 NA other upstream 797474 21462693 ~ 21463030 (-)
G121756 NA other upstream 825048 21490267 ~ 21547037 (-)
G122733 LOC106592382 other upstream 1131288 21796507 ~ 21812432 (-)

Expression

LOC110537468(LOC106605860) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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LOC110537468(LOC106605860) Expression in each Bioproject

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LOC110537468(LOC106605860) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network