Gene
RNA
| Item | Value |
|---|---|
| gene id | erfl3 |
| gene name | LOC106576393 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20900204 ~ 20977481 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ETS domain-containing transcription factor ERF-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021623653.2 | False | 4481 | mRNA | 0.56 | 5 | 20900204 | 20977481 |
| XM_021623645.2 | False | 4494 | mRNA | 0.56 | 5 | 20900206 | 20977481 |
| TU139024 | False | 977 | TUCP | 0.40 | 4 | 20900274 | 20973920 |
| TU139026 | True | 1237 | TUCP | 0.43 | 2 | 20974851 | 20976199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pou2f2a | pou2f2 | coding | upstream | 15128 | 20741051 ~ 20885076 (+) |
| LOC110537492 | LOC106605858 | coding | upstream | 204774 | 20679841 ~ 20695430 (+) |
| LOC110537453 | atn1 | coding | upstream | 250931 | 20629126 ~ 20649273 (+) |
| LOC110537439 | LOC106576545 | coding | upstream | 271722 | 20615636 ~ 20628482 (+) |
| LOC110537428 | mlf2 | coding | upstream | 287724 | 20608551 ~ 20612480 (+) |
| LOC110509768 | LOC106576258 | coding | downstream | 12650 | 20990131 ~ 21058856 (+) |
| LOC110509817 | LOC106576382 | coding | downstream | 97759 | 21075240 ~ 21103699 (+) |
| LOC110509776 | LOC106576357 | coding | downstream | 128019 | 21105500 ~ 21136731 (+) |
| LOC110534415 | grik5 | coding | downstream | 170841 | 21148322 ~ 21311249 (+) |
| LOC110537588 | NA | coding | downstream | 417683 | 21395164 ~ 21411507 (+) |
| G120471 | NA | non-coding | upstream | 24365 | 20875403 ~ 20875839 (+) |
| G120469 | NA | non-coding | upstream | 25696 | 20874273 ~ 20874508 (+) |
| G120468 | NA | non-coding | upstream | 28985 | 20870965 ~ 20871219 (+) |
| G120466 | NA | non-coding | upstream | 31868 | 20868019 ~ 20868336 (+) |
| G120465 | NA | non-coding | upstream | 32380 | 20867573 ~ 20867824 (+) |
| G120512 | NA | non-coding | downstream | 29608 | 21007089 ~ 21011765 (+) |
| G120540 | NA | non-coding | downstream | 130612 | 21108093 ~ 21108341 (+) |
| G120555 | NA | non-coding | downstream | 187533 | 21165014 ~ 21165265 (+) |
| G120556 | NA | non-coding | downstream | 189208 | 21166689 ~ 21167553 (+) |
| G120557 | NA | non-coding | downstream | 195514 | 21172995 ~ 21174078 (+) |
| G120169 | NA | other | upstream | 481076 | 20407862 ~ 20419128 (+) |
| G120259 | NA | other | upstream | 579948 | 20319739 ~ 20320256 (+) |
| LOC110537348 | LOC106575899 | other | upstream | 715579 | 20179254 ~ 20185414 (+) |
| G120211 | NA | other | upstream | 728823 | 20171082 ~ 20171381 (+) |
| zyx | zyx | other | upstream | 743094 | 20145710 ~ 20165887 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 564616 | 21532987 ~ 21547038 (+) |
| G121677 | NA | other | downstream | 607940 | 21585421 ~ 21586101 (+) |
| LOC110537735 | LOC106595974 | other | downstream | 843733 | 21821165 ~ 21825285 (+) |
| G122030 | NA | other | downstream | 1039181 | 22015130 ~ 22018815 (+) |
