Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509768 |
| gene name | LOC106576258 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 20990131 ~ 21058856 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein DDB_G0283357-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036941543.1 | False | 10478 | mRNA | 0.57 | 21 | 20990131 | 21058856 |
| XM_036941553.1 | False | 10554 | mRNA | 0.57 | 21 | 20991610 | 21058856 |
| XM_036941535.1 | False | 10556 | mRNA | 0.57 | 21 | 20991611 | 21058856 |
| TU139028 | True | 1404 | TUCP | 0.53 | 2 | 20991754 | 21015891 |
20,970,000
20,980,000
20,990,000
21,000,000
21,010,000
21,020,000
21,030,000
21,040,000
21,050,000
21,060,000
21,070,000
21,080,000
21,090,000
21,100,000
21,110,000
NC_048566.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| erfl3 | LOC106576393 | coding | upstream | 12650 | 20900204 ~ 20977481 (+) |
| pou2f2a | pou2f2 | coding | upstream | 105055 | 20741051 ~ 20885076 (+) |
| LOC110537492 | LOC106605858 | coding | upstream | 294701 | 20679841 ~ 20695430 (+) |
| LOC110537453 | atn1 | coding | upstream | 340858 | 20629126 ~ 20649273 (+) |
| LOC110537439 | LOC106576545 | coding | upstream | 361649 | 20615636 ~ 20628482 (+) |
| LOC110509817 | LOC106576382 | coding | downstream | 16384 | 21075240 ~ 21103699 (+) |
| LOC110509776 | LOC106576357 | coding | downstream | 46644 | 21105500 ~ 21136731 (+) |
| LOC110534415 | grik5 | coding | downstream | 89466 | 21148322 ~ 21311249 (+) |
| LOC110537588 | NA | coding | downstream | 336308 | 21395164 ~ 21411507 (+) |
| LOC110537581 | LOC106605559 | coding | downstream | 418786 | 21477642 ~ 21491358 (+) |
| G120502 | NA | non-coding | upstream | 19147 | 20970455 ~ 20970984 (+) |
| G120498 | NA | non-coding | upstream | 27318 | 20962063 ~ 20962813 (+) |
| G120495 | NA | non-coding | upstream | 31303 | 20958105 ~ 20958828 (+) |
| G120487 | NA | non-coding | upstream | 56087 | 20932743 ~ 20934044 (+) |
| G120471 | NA | non-coding | upstream | 114292 | 20875403 ~ 20875839 (+) |
| G120540 | NA | non-coding | downstream | 49237 | 21108093 ~ 21108341 (+) |
| G120555 | NA | non-coding | downstream | 106158 | 21165014 ~ 21165265 (+) |
| G120556 | NA | non-coding | downstream | 107833 | 21166689 ~ 21167553 (+) |
| G120557 | NA | non-coding | downstream | 114139 | 21172995 ~ 21174078 (+) |
| G120559 | NA | non-coding | downstream | 116619 | 21175475 ~ 21175735 (+) |
| G120169 | NA | other | upstream | 571003 | 20407862 ~ 20419128 (+) |
| G120259 | NA | other | upstream | 669875 | 20319739 ~ 20320256 (+) |
| LOC110537348 | LOC106575899 | other | upstream | 805506 | 20179254 ~ 20185414 (+) |
| G120211 | NA | other | upstream | 818750 | 20171082 ~ 20171381 (+) |
| LOC118938333 | LOC106605563 | other | downstream | 483241 | 21532987 ~ 21547038 (+) |
| G121677 | NA | other | downstream | 526565 | 21585421 ~ 21586101 (+) |
| LOC110537735 | LOC106595974 | other | downstream | 762358 | 21821165 ~ 21825285 (+) |
| G122030 | NA | other | downstream | 957806 | 22015130 ~ 22018815 (+) |
| LOC110537939 | apoc1 | other | downstream | 1283671 | 22342491 ~ 22346615 (+) |
